Evidence map›Paper›PMID 39288270›Full record

ArticleJCI insight2024

Quantitative proteomics of patient fibroblasts reveal biomarkers and diagnostic signatures of mitochondrial disease.

Sandrina P Correia, Marco F Moedas, Lucie S Taylor, Karin Naess, Albert Z Lim, Robert McFarland, Zuzanna Kazior, Anastasia Rumyantseva, Rolf Wibom, Martin Engvall and 10 more

Abstract read
In one paragraph

Article in JCI insight, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. RNA Sequencing Resolves Cryptic Pathogenic Variants in Mitochondrial Disease.Annals of clinical and translational neurology · 2026
    Article
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Sandrina P CorreiaDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Marco F MoedasCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Lucie S TaylorMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Karin NaessCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Albert Z LimMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Robert McFarlandMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Zuzanna KaziorCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Anastasia RumyantsevaDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Rolf WibomCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Martin EngvallDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Helene BruhnCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Nicole LeskoDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Ákos VégváriDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Lukas KällScience for Life Laboratory, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH-Royal Institute of Technology, Solna, Sweden.
Matthias TrostMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Charlotte L AlstonMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Christoph FreyerCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.
Robert W TaylorMitochondrial Research Group, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Anna WedellDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Anna WredenbergCentre for Inherited Metabolic Diseases, Karolinska University Hospital, Stockholm, Sweden.

Funding

Medical Research Council MR/S005021/1Wellcome Trust
6 · The paper itself

Abstract

BACKGROUNDMitochondrial diseases belong to the group of inborn errors of metabolism (IEM), with a prevalence of 1 in 2,000-5,000 individuals. They are the most common form of IEM, but, despite advances in next-generation sequencing technologies, almost half of the patients are left genetically undiagnosed.METHODSWe investigated a cohort of 61 patients with defined mitochondrial disease to improve diagnostics, identify biomarkers, and correlate metabolic pathways to specific disease groups. Clinical presentations were structured using human phenotype ontology terms, and mass spectrometry-based proteomics was performed on primary fibroblasts. Additionally, we integrated 6 patients carrying variants of uncertain significance (VUS) to test proteomics as a diagnostic expansion.RESULTSProteomic profiles from patient samples could be classified according to their biochemical and genetic characteristics, with the expression of 5 proteins (GPX4, MORF4L1, MOXD1, MSRA, and TMED9) correlating with the disease cohort, thus acting as putative biomarkers. Pathway analysis showed a deregulation of inflammatory and mitochondrial stress responses. This included the upregulation of glycosphingolipid metabolism and mitochondrial protein import, as well as the downregulation of arachidonic acid metabolism. Furthermore, we could assign pathogenicity to a VUS in MRPS23 by demonstrating the loss of associated mitochondrial ribosome subunits.CONCLUSIONWe established mass spectrometry-based proteomics on patient fibroblasts as a viable and versatile tool for diagnosing patients with mitochondrial disease.FUNDINGThe NovoNordisk Foundation, Knut and Alice Wallenberg Foundation, Wellcome Centre for Mitochondrial Research, UK Medical Research Council, and the UK NHS Highly Specialised Service for Rare Mitochondrial Disorders of Adults and Children.

Indexed as

BiomarkersFibroblastsMitochondrial DiseasesProteomicsAdolescentAdultChildChild, PreschoolCohort StudiesFemaleHumansInfantMaleMitochondriaMitochondrial ProteinsBiomarkersMitochondrial ProteinsMetabolismMitochondriaMolecular diagnosisProteomics

Identifiers

PMID39288270
PMCPMC11530135

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.