Evidence map›Paper›PMID 39285420›Full record

ArticleBioData mining2024

Identifying heterogeneous subgroups of systemic autoimmune diseases by applying a joint dimension reduction and clustering approach to immunomarkers.

Chia-Wei Chang, Hsin-Yao Wang, Wan-Ying Lin, Yu-Chiang Wang, Wei-Lin Lo, Ting-Wei Lin, Jia-Ruei Yu, Yi-Ju Tseng

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Article in BioData mining, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2 citing papers in PubMed.

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8 authors.

Chia-Wei Chang *Department of Computer Science, National Yang Ming Chiao Tung University, Hsinchu, Taiwan.
Hsin-Yao Wang *Department of Laboratory Medicine, Chang Gung Memorial Hospital at Linkou, Taoyuan, Taiwan.
Wan-Ying LinDepartment of Laboratory Medicine, Chang Gung Memorial Hospital at Linkou, Taoyuan, Taiwan.
Yu-Chiang WangDepartment of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
Wei-Lin LoDepartment of Rheumatology, Chang Gung Memorial Hospital at Keelung, Keelung, Taiwan.
Ting-Wei LinDepartment of Laboratory Medicine, Chang Gung Memorial Hospital at Linkou, Taoyuan, Taiwan.
Jia-Ruei YuDepartment of Laboratory Medicine, Chang Gung Memorial Hospital at Linkou, Taoyuan, Taiwan.
Yi-Ju TsengDepartment of Computer Science, National Yang Ming Chiao Tung University, Hsinchu, Taiwan. yjtseng@nycu.edu.tw.

Funding

Chang Gung Memorial Hospital CMRPD3K0011Chang Gung Memorial Hospital CORPG2P0071Keelung Chang Gung Memorial Hospital and National Yang Ming Chiao Tung University Joint Research Program CGMH-NYCU-113-CORPG2P0071National Science and Technology Council 111-2320-B-182A-002-MY2National Science and Technology Council 111-2628-E-A49-026-MY3
6 · The paper itself

Abstract

backgroundThe high complexity of systemic autoimmune diseases (SADs) has hindered precise management. This study aims to investigate heterogeneity in SADs.

methodsWe applied a joint cluster analysis, which jointed multiple correspondence analysis and k-means, to immunomarkers and measured the heterogeneity of clusters by examining differences in immunomarkers and clinical manifestations. The electronic health records of patients who received an antinuclear antibody test and were diagnosed with SADs, namely systemic lupus erythematosus (SLE), rheumatoid arthritis (RA), and Sjögren's syndrome (SS), were retrieved between 2001 and 2016 from hospitals in Taiwan.

resultsWith distinctive patterns of immunomarkers, a total of 11,923 patients with the three SADs were grouped into six clusters. None of the clusters was composed only of a single SAD, and these clusters demonstrated considerable differences in clinical manifestation. Both patients with SLE and SS had a more dispersed distribution in the six clusters. Among patients with SLE, the occurrence of renal compromise was higher in Clusters 3 and 6 (52% and 51%) than in the other clusters (p < 0.001). Cluster 3 also had a high proportion of patients with discoid lupus (60%) than did Cluster 6 (39%; p < 0.001). Patients with SS in Cluster 3 were the most distinctive because of the high occurrence of immunity disorders (63%) and other and unspecified benign neoplasm (58%) with statistical significance compared with the other clusters (all p < 0.05).

conclusionsThe immunomarker-driven clustering method could recognise more clinically relevant subgroups of the SADs and would provide a more precise diagnosis basis.

Indexed as

Autoimmune diseasesCluster analysisDisease heterogeneityImmune markers

Identifiers

PMID39285420
PMCPMC11403832

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