Evidence map›Paper›PMID 39285064›Full record

ArticleArchives of virology2024

Isolation and genetic characterization of novel bovine parechoviruses from Japanese black cattle.

Mami Oba, Mayo Shimotori, Natsuko Teshima, Lisa Yamaguchi, Hitoshi Takemae, Shoichi Sakaguchi, Hiroho Ishida, Hironobu Murakami, Tetsuya Mizutani, Makoto Nagai

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mami ObaCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Mayo ShimotoriSchool of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
Natsuko TeshimaCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Lisa YamaguchiCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Hitoshi TakemaeCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Shoichi SakaguchiDepartment of Microbiology and Infection Control, Faculty of Medicine, Osaka Medical and Pharmaceutical University, Osaka, 569-8686, Japan.
Hiroho IshidaSchool of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
Hironobu MurakamiSchool of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
Tetsuya MizutaniCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Makoto NagaiCenter for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan. m-nagai@azabu-u.ac.jp.ORCID http://orcid.org/0000-0001-5884-620X

Funding

JSPS KAKENHI 21K05947
6 · The paper itself

Abstract

Novel bovine parechoviruses (Bo ParVs) were isolated from the feces of Japanese black cattle. Phylogenetic analysis revealed that the novel Bo ParVs formed an independent cluster, exhibiting 72.2-75.6% nucleotide sequence identity to previous Bo ParVs, suggesting that they represent a new genotype. Bo ParVs, including the novel Bo ParVs, shared sequence similarity with each other in the 3' untranslated region (3'UTR) and exhibited low sequence similarity (<38.9% identity) to other parechoviruses. However, a secondary structure prediction of the 3'UTR revealed that the Bo ParVs shared conserved motifs in domain 2 with parechovirus B and E, suggesting some evolutionary constrains in this region.

Indexed as

Cattle DiseasesFecesParechovirusPhylogenyPicornaviridae Infections3' Untranslated RegionsAnimalsCattleGenotypeJapanNucleic Acid ConformationRNA, Viral3' Untranslated RegionsRNA, Viral

Identifiers

PMID39285064
PMCPMC11405471

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.