Evidence map›Paper›PMID 39282359›Full record

ArticlebioRxiv : the preprint server for biology2024

β-barrel proteins dictate the effect of core oligosaccharide composition on outer membrane mechanics.

Dylan Fitzmaurice, Anthony Amador, Tahj Starr, Glen M Hocky, Enrique R Rojas

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Dylan FitzmauriceDepartment of Biology, New York University, New York, New York, 10003, USA.
Anthony AmadorDepartment of Biology, New York University, New York, New York, 10003, USA.
Tahj StarrDepartment of Biology, New York University, New York, New York, 10003, USA.
Glen M HockyDepartment of Chemistry and Simons Center for Computational Physical Chemistry, New York University, New York, New York, 10003, USA.
Enrique R RojasDepartment of Biology, New York University, New York, New York, 10003, USA.ORCID 0000-0003-3388-2794

Funding

Harnessing simulations to uncover molecular mechanisms of mechanosensingR35GM138312 · NIGMS · NEW YORK UNIVERSITY · PI Glen Hocky · 2020 to 2026
$3.0M
Exploring mechanical mechanisms of antibiotic resistanceR35GM143057 · NIGMS · NEW YORK UNIVERSITY · PI ROJAS, ENRIQUE · 2021 to 2025
$1.9M
NIGMS NIH HHS R35 GM138312NIGMS NIH HHS R35 GM143057
6 · The paper itself

Abstract

The outer membrane is the defining structure of Gram-negative bacteria. We previously demonstrated that it is critical for the mechanical integrity of the cell envelope and therefore to the robustness of the bacterial cell as a whole. Here, to determine the key molecules and moieties within the outer membrane that underlie its contribution to cell envelope mechanics, we measured cell-envelope stiffness across several sets of mutants with altered outer-membrane sugar content, protein content, and electric charge. To decouple outer membrane stiffness from total cell envelope stiffness, we developed a novel microfluidics-based "osmotic force extension" assay. In tandem, we developed a simple method to increase throughput of microfluidics experiments by performing them on color-coded pools of mutants. Using Statement of Significance: The outer membrane is the defining cellular structure of Gram-negative bacteria, a group that contains many important pathogens like

Identifiers

PMID39282359
PMCPMC11398377

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.