Evidence map›Paper›PMID 39282201›Full record

ReviewIndian journal of microbiology2024

SeqCode: A Nomenclatural Code for Prokaryotes.

Pushp Lata, Vatsal Bhargava, Sonal Gupta, Ajaib Singh, Kiran Bala, Rup Lal

Abstract readReview
In one paragraph

Review in Indian journal of microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pushp LataDepartment of Zoology, University of Delhi, Delhi, 110007 India.
Vatsal BhargavaDepartment of Zoology, University of Delhi, Delhi, 110007 India.
Sonal GuptaDepartment of Zoology, University of Delhi, Delhi, 110007 India.
Ajaib SinghDepartment of Zoology, Sri Venkateswara College, University of Delhi, Delhin, 110021 India.
Kiran BalaDepartment of Zoology, Deshbandhu College, University of Delhi, Delhi, 110019 India.
Rup LalAcharya Narendra Dev College, University of Delhi, Delhi, 110019 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SeqCode is a nomenclatural code for naming prokaryotes based on genetic information. With the majority of prokaryotes being inaccessible as pure cultures, they are not eligible for naming under the International Code of Nomenclature of Prokaryotes. To address this challenge, a new concept that is SeqCode, which assign names to prokaryotes on the basis of genome sequence, has been announced in 2022. The valid publication of names for prokaryotes based on isolated genome, metagenome-assembled genomes, or single-amplified genome sequences. It operates through a registration portal, SeqCode Registry, where metadata is linked to names and nomenclatural types. This code provides a framework for reproducible nomenclature for all prokaryotes, either culturable or not and facilitates communication across all microbiological disciplines. Additionally, the SeqCode includes provisions for updating and revising names as new data becomes available. By providing a standardized system for naming and classifying these microorganisms based on their genetic information, the SeqCode will facilitate the discovery, understanding and comparison of these microorganisms, helping us to understand their role in the environment and how they contribute to the functioning of the Earth.

Indexed as

ICNPSeqCodeTaxonomyUncultured prokaryotes

Identifiers

PMID39282201
PMCPMC11399350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.