Evidence map›Paper›PMID 39280312›Full record

ArticleNarra J2024

Comparison of RT-PCR cycle threshold values between individual and pooled SARS-CoV-2 infected nasopharyngeal swab specimens.

Handa Yani, Toh D Yuan, Aridamuriany D Lubis, Lia K Iswara, Inke Nd Lubis

Abstract readComparative Study
In one paragraph

Article in Narra J, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Handa YaniDepartment of Pediatric, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia.
Toh D YuanDepartment of Biomedical Engineering, College of Design and Engineering, National University of Singapore, Singapore.
Aridamuriany D LubisDepartment of Pediatric, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia.
Lia K IswaraDepartment of Microbiology, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia.
Inke Nd LubisDepartment of Pediatric, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular reverse transcription-polymerase chain reaction (RT-PCR) testing of respiratory tract swabs has become mandatory to confirm the diagnosis of coronavirus disease 2019 (COVID-19). However, RT-PCR tests are expensive, require standardized equipment, and relatively long testing times, and the sample pooling method has been introduced to solve this issue. The aim of this study was to compare the cycle threshold (Ct) values of the individual sample and pooled sample methods to assess how accurate the pooling method was. Repeat RT-PCR examinations were initially performed to confirm the Ct values for each sample before running the pooled test procedure. Sample extraction and amplification were performed in both assays to detect ORF1ab, N, and E genes with a cut-off point value of Ct <38. Overall, there was no difference in Ct values between individual sample and pooled sample groups at all concentrations (

Indexed as

COVID-19NasopharynxReverse Transcriptase Polymerase Chain ReactionSARS-CoV-2Specimen HandlingCOVID-19 Nucleic Acid TestingHumansCOVID-19Ct valuediagnosticpooling methodRT-PCR

Identifiers

PMID39280312
PMCPMC11391988

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.