Evidence map›Paper›PMID 39280296›Full record

ArticleNarra J2024

Molecular interaction analysis of ferulic acid (4-hydroxy-3-methoxycinnamic acid) as main bioactive compound from palm oil waste against MCF-7 receptors: An in silico study.

Mochammad A Herdiansyah, Rafli Rizaldy, Mochamad Rt Alifiansyah, Amelia Jt Fetty, Dhea Anggraini, Niken Agustina, Fariz R Alfian, Primanita Nm Setianingsih, Verah Elfianah, Halimatus S Aulia and 11 more

Abstract read
In one paragraph

Article in Narra J, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Multi-stage insecticide potentials ofCurrent research in parasitology & vector-borne diseases · 2026
    Article
  3. Review
  4. Article
  5. Open veterinary journal · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Mochammad A HerdiansyahDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Rafli RizaldyDepartment of Chemistry, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Mochamad Rt AlifiansyahDepartment of Pharmaceutical, Faculty of Pharmacy, Universitas Airlangga, Surabaya, Indonesia.
Amelia Jt FettyDepartment of Chemistry, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Dhea AnggrainiDepartment of Practical Pharmacy, Faculty of Pharmacy, Universitas Airlangga, Surabaya, Indonesia.
Niken AgustinaDepartment of Chemistry, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Fariz R AlfianDepartment of Chemistry, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Primanita Nm SetianingsihDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Verah ElfianahDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Halimatus S AuliaDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Justitia Erp PutraDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Arif Nm AnsoriPostgraduate School, Universitas Airlangga, Surabaya, Indonesia.
Viol D KharismaDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Vikash JakhmolaUttaranchal Institute of Pharmaceutical Sciences, Uttaranchal University, Dehradun, India.
Hery PurnobasukiDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Intan A PratiwiDepartment of Biology, Faculty of Science and Technology, Universitas Airlangga, Surabaya, Indonesia.
Maksim RebezovDepartment of Scientific Research, V. M. Gorbatov Federal Research Center for Food Systems, Moscow, Russian Federation.
Svetlana ShmelevaMoscow State University of Technologies and Management (The First Cossack University), Moscow, Russian Federation.
Tatyana BonkaloResearch Institute for Healthcare Organization and Medical Management, Moscow Healthcare Department, Moscow, Russian Federation.
Dmitriy F KovalchukKuban State University, Krasnodar, Russian Federation.
Rahadian ZainulDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Negeri Padang, Padang, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ferulic acid (4-hydroxy-3-methoxycinnamic acid) is a phytochemical compound that is commonly found in conjugated forms within mono-, di-, polysaccharides and other organic compounds in cell walls of grain, fruits, and vegetables. This compound is highly abundant in the palm oil waste. The aim of the study was to predict the anticancer activity of ferulic acid against the breast cancer cell lines (MCF-7) receptors through a computational analysis. MCF-7 receptors with PDB IDs of 1R5K, 2IOG, 4IV2, 4IW6, 5DUE, 5T92, and 5U2B were selected based on the Simplified Molecular Input Line Entry System (SMILES) similarity of the native ligand. Thereafter, the protein was prepared on Chimera 1.16 and docked with ferulic acid on Autodock Vina 1.2.5. The ligand-protein complex interaction was validated by computing the root mean square fluctuation (RMSF) and radius of gyration (Rg) through molecular dynamic simulation. In addition, an absorption, distribution, metabolism, excretion, and toxicity (ADMET) prediction was performed on ferulic acid using the pkCSM platform. The molecular docking revealed that the ferulic acid could interact with all receptors as indicated by the affinity energy <-5 kcal/mol. The compound had the most optimum interaction with receptor 2IOG (affinity energy=-6.96 kcal/mol), involving hydrophobic interaction (n=12) and polar hydrogen interaction (n=4). The molecular dynamic simulation revealed that the complex had an RMSF of 1.713 Å with a fluctuation of Rg value around 1.000 Å. The ADMET properties of ferulic acid suggested that the compound is an ideal drug candidate. In conclusion, this study suggested that ferulic acid, which can be isolated from palm oil waste, has the potential to interact with MCF-7 receptors.

Indexed as

Coumaric AcidsPalm OilAntineoplastic AgentsBreast NeoplasmsComputer SimulationHumansMCF-7 CellsMolecular Docking SimulationMolecular Dynamics SimulationAntineoplastic AgentsCoumaric Acidsferulic acidPalm OilADMET propertiescancerferulic acidin silicomedicine

Identifiers

PMID39280296
PMCPMC11391962

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.