Evidence map›Paper›PMID 39278894›Full record

ArticleCurrent microbiology2024

Complete Genome of Achromobacter xylosoxidans, a Nitrogen-Fixing Bacteria from the Rhizosphere of Cowpea (Vigna unguiculata [L.] Walp) Tolerant to Cucumber Mosaic Virus Infection.

Adedapo O Adediji, James A Ojo, Adebayo A Olowoake, Khadijat O Alabi, Gabriel I Atiri

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Article in Current microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adedapo O AdedijiResearch Office, Pan African University Life and Earth Sciences Institute (Including Health and Agriculture), Ibadan, Nigeria. adedapo.adediji@paulesi.org.ng.ORCID http://orcid.org/0000-0001-5268-019X
James A OjoDepartment of Crop Production, Kwara State University, Malete, Ilorin, Nigeria.ORCID http://orcid.org/0000-0001-7476-4546
Adebayo A OlowoakeDepartment of Crop Production, Kwara State University, Malete, Ilorin, Nigeria.ORCID http://orcid.org/0000-0002-5961-4846
Khadijat O AlabiDepartment of Crop Production, Kwara State University, Malete, Ilorin, Nigeria.ORCID http://orcid.org/0000-0002-7689-7059
Gabriel I AtiriDepartment of Crop Protection and Environmental Biology, University of Ibadan, Ibadan, Nigeria.ORCID http://orcid.org/0000-0001-9271-3275

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Achromobacter xylosoxidans is one of the nitrogen-fixing bacteria associated with cowpea rhizosphere across Africa. Although its role in improving soil fertility and inducing systemic resistance in plants against pathogens has been documented, there is limited information on its complete genomic characteristics from cowpea roots. Here, we report the complete genome sequence of A. xylosoxidans strain DDA01 isolated from the topsoil of a field where cowpea plants tolerant to cucumber mosaic virus (CMV) were grown in Ibadan, Nigeria. The genome of DDA01 was sequenced via Illumina MiSeq and contained 6,930,067 nucleotides with 67.55% G + C content, 73 RNAs, 59 tRNAs, and 6421 protein-coding genes, including those associated with nitrogen fixation, phosphate solubilization, Indole3-acetic acid production, and siderophore activity. Eleven genetic clusters for secondary metabolites, including alcaligin, were identified. The potential of DDA01 as a plant growth-promoting bacteria with genetic capabilities to enhance soil fertility for resilience against CMV infection in cowpea is discussed. To our knowledge, this is the first complete genome of diazotrophic bacteria obtained from cowpea rhizosphere in sub-Saharan Africa, with potential implications for improved soil fertility, plant disease resistance, and food security.

Indexed as

Achromobacter denitrificansCucumovirusGenome, BacterialRhizosphereSoil MicrobiologyVignaBase CompositionNigeriaNitrogen FixationNitrogen-Fixing BacteriaPhylogenyPlant DiseasesPlant Roots

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.