Evidence map›Paper›PMID 39273310›Full record

ArticleInternational journal of molecular sciences2024

On the Stabilizing Effect of Aspartate and Glutamate and Its Counteraction by Common Denaturants.

Guido Izzi, Marco Campanile, Pompea Del Vecchio, Giuseppe Graziano

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Guido IzziInstitute of Biostructure and Bioimaging, National Research Council, Via P. Castellino, 80131 Naples, Italy.
Marco CampanileDepartment of Chemical Sciences, University of Naples Federico II, Via Cintia, 80126 Naples, Italy.ORCID 0009-0004-7798-4228
Pompea Del VecchioDepartment of Chemical Sciences, University of Naples Federico II, Via Cintia, 80126 Naples, Italy.ORCID 0000-0002-9760-3478
Giuseppe GrazianoDepartment of Science and Technology, University of Sannio, Via F. De Sanctis, 82100 Benevento, Italy.ORCID 0000-0001-6935-8172

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By performing differential scanning calorimetry(DSC) measurements on RNase A, we studied the stabilization provided by the addition of potassium aspartate(KAsp) or potassium glutamate (KGlu) and found that it leads to a significant increase in the denaturation temperature of the protein. The stabilization proves to be mainly entropic in origin. A counteraction of the stabilization provided by KAsp or KGlu is obtained by adding common denaturants such as urea, guanidinium chloride, or guanidinium thiocyanate. A rationalization of the experimental data is devised on the basis of a theoretical approach developed by one of the authors. The main contribution to the conformational stability of globular proteins comes from the gain in translational entropy of water and co-solute ions and/or molecules for the decrease in solvent-excluded volume associated with polypeptide folding (i.e., there is a large decrease in solvent-accessible surface area). The magnitude of this entropic contribution increases with the number density and volume packing density of the solution. The two destabilizing contributions come from the conformational entropy of the chain, which should not depend significantly on the presence of co-solutes, and from the direct energetic interactions between co-solutes and the protein surface in both the native and denatured states. It is the magnitude of the latter that discriminates between stabilizing and destabilizing agents.

Indexed as

Aspartic AcidGlutamic AcidProtein DenaturationCalorimetry, Differential ScanningEntropyGuanidineProtein ConformationProtein StabilityRibonuclease, PancreaticThermodynamicsUreaAspartic AcidGlutamic AcidGuanidineRibonuclease, PancreaticUreaaspartatecounteractiondenaturantsglutamateprotein conformational stability

Identifiers

PMID39273310
PMCPMC11395698

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.