Evidence map›Paper›PMID 39273290›Full record

ArticleInternational journal of molecular sciences2024

A Bioinformatics Investigation of Hub Genes Involved in Treg Migration and Its Synergistic Effects, Using Immune Checkpoint Inhibitors for Immunotherapies.

Nari Kim, Seoungwon Na, Junhee Pyo, Jisung Jang, Soo-Min Lee, Kyungwon Kim

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nari KimBiomedical Research Center, Asan Institute for Life Sciences, Asan Medical Center, Seoul 05505, Republic of Korea.ORCID 0000-0001-5384-9540
Seoungwon NaBiomedical Research Center, Asan Institute for Life Sciences, Asan Medical Center, Seoul 05505, Republic of Korea.
Junhee PyoCollege of Pharmacy, Chungbuk National University, Cheongju 28644, Republic of Korea.
Jisung JangTrial Informatics Inc., Seoul 05544, Republic of Korea.ORCID 0000-0001-9300-3945
Soo-Min LeeSamjin Pharmaceutical Co., Ltd., Seoul 04054, Republic of Korea.
Kyungwon KimTrial Informatics Inc., Seoul 05544, Republic of Korea.ORCID 0000-0002-1532-5970

Funding

Korea Health Industry Development Institute HR18C0016National Research Foundation 2022M3A9G1014476National Research Foundation of Korea 2021R1A2B5B03001891National Research Foundation of Korea RS-2023-00227084
6 · The paper itself

Abstract

This study aimed to identify hub genes involved in regulatory T cell (Treg) function and migration, offering insights into potential therapeutic targets for cancer immunotherapy. We performed a comprehensive bioinformatics analysis using three gene expression microarray datasets from the GEO database. Differentially expressed genes (DEGs) were identified to pathway enrichment analysis to explore their functional roles and potential pathways. A protein-protein interaction network was constructed to identify hub genes critical for Treg activity. We further evaluated the co-expression of these hub genes with immune checkpoint proteins (PD-1, PD-L1, CTLA4) and assessed their prognostic significance. Through this comprehensive analysis, we identified CCR8 as a key player in Treg migration and explored its potential synergistic effects with ICIs. Our findings suggest that CCR8-targeted therapies could enhance cancer immunotherapy outcomes, with breast invasive carcinoma (BRCA) emerging as a promising indication for combination therapy. This study highlights the potential of CCR8 as a biomarker and therapeutic target, contributing to the development of targeted cancer treatment strategies.

Indexed as

Computational BiologyImmune Checkpoint InhibitorsImmunotherapyProtein Interaction MapsT-Lymphocytes, RegulatoryBiomarkers, TumorCell MovementGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansNeoplasmsPrognosisReceptors, CCR8Biomarkers, TumorImmune Checkpoint InhibitorsReceptors, CCR8immune responseregulatory T cellTreg migration

Identifiers

PMID39273290
PMCPMC11395080

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.