Evidence map›Paper›PMID 39273273›Full record

ArticleInternational journal of molecular sciences2024

Mining Candidate Genes for Leaf Angle in

Aoyi Peng, Shuyu Li, Yuwen Wang, Fengjie Cheng, Jun Chen, Xiaoxiao Zheng, Jie Xiong, Ge Ding, Bingchao Zhang, Wen Zhai and 3 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Aoyi PengCollege of Agriculture, Yangtze University, Jingzhou 434025, China.
Shuyu LiJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.ORCID 0000-0002-3402-4903
Yuwen WangJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.ORCID 0000-0002-0933-6470
Fengjie ChengCollege of Agriculture, Yangtze University, Jingzhou 434025, China.
Jun ChenFuzhou Teachers' College, East China University of Technology, Fuzhou 344000, China.
Xiaoxiao ZhengJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.
Jie XiongJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.
Ge DingJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.ORCID 0000-0002-5157-1116
Bingchao ZhangJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.ORCID 0000-0003-1754-1869
Wen ZhaiFuzhou Teachers' College, East China University of Technology, Fuzhou 344000, China.
Laiqiang SongJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.
Wenliang WeiCollege of Agriculture, Yangtze University, Jingzhou 434025, China.
Lunlin ChenJiangxi Province Key Laboratory of Oil Crops Genetic Improvement (2024SSY04031), Nanchang 330200, China.

Funding

Jiangxi Province Key Research and Development Program Project 20223BBF61002Jiangxi Province Major Disciplines Academic and Technical Leaders Training Program 20204BCJL22046Jiangxi Province Major Disciplines Academic and Technical Leaders Training Program 20212BCJ23015Special Fund Project for Basic Research and Talent Training of Jiangxi Academy of Agricultural Sciences JXSNKYJCRC202203
6 · The paper itself

Abstract

Leaf angle (LA) is an important trait of plant architecture, and individuals with narrow LA can better capture canopy light under high-density planting, which is beneficial for increasing the overall yield per unit area. To study the genetic basis and molecular regulation mechanism of leaf angle in rapeseed, we carried out a series of experiments. Quantitative trait loci (QTL) mapping was performed using the RIL population, and seven QTLs were identified. Transcriptome analysis showed that the cell wall formation/biogenesis processes and biosynthesis/metabolism of cell wall components were the most enrichment classes. Most differentially expressed genes (DEGs) involved in the synthesis of lignin, xylan, and cellulose showed down-regulated expression in narrow leaf material. Microscopic analysis suggested that the cell size affected by the cell wall in the junction area of the stem and petiole was the main factor in leaf petiole angle (LPA) differences. Combining QTL mapping and RNA sequencing, five promising candidate genes

Indexed as

Brassica napusChromosome MappingPlant LeavesQuantitative Trait LociCell WallGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantPhenotypeSequence Analysis, RNATranscriptomecell wallleaf angleQTL mappingrapeseedtranscriptome

Identifiers

PMID39273273
PMCPMC11394825

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.