Evidence map›Paper›PMID 39271675›Full record

ArticleNature communications2024

Conserved transcriptional regulation by BRN1 and BRN2 in neocortical progenitors drives mammalian neural specification and neocortical expansion.

Soraia Barão, Yijun Xu, José P Llongueras, Rachel Vistein, Loyal Goff, Kristina J Nielsen, Byoung-Il Bae, Richard S Smith, Christopher A Walsh, Genevieve Stein-O'Brien and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  13. The chromatin remodeler ADNP regulates neurodevelopmental disorder risk genes and neocortical neurogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Soraia BarãoThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. sbarao@jhmi.edu.ORCID 0000-0002-7786-3002
Yijun XuThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID 0000-0002-3562-1179
José P LlonguerasThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
Rachel VisteinThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID 0000-0002-2172-9947
Loyal GoffThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID 0000-0003-2875-451X
Kristina J NielsenThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID 0000-0002-9155-2972
Byoung-Il BaeDepartment of Neuroscience, University of Connecticut School of Medicine, Farmington, CT, 06032, USA.ORCID 0000-0002-9958-678X
Richard S SmithNorthwestern University, Feinberg School of Medicine, Department of Pharmacology, Chicago, IL, 60611, USA.
Christopher A WalshDivision of Genetics and Genomics, Manton Center for Orphan Disease Research, Boston Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA.ORCID 0000-0002-0156-2238
Genevieve Stein-O'BrienThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.ORCID 0000-0001-8681-9110
Ulrich MüllerThe Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA. umuelle3@jhmi.edu.ORCID 0000-0003-2736-6494

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
Accessible technologies for high-throughput, whole-brain reconstructions of molecularly characterized mammalian neuronsRF1MH121539 · NIMH · JOHNS HOPKINS UNIVERSITY · PI MILLER, MICHAEL I, MUELLER, ULRICH · 2019 to 2019
$3.6M
Mapping the dynamics of mouse neurogenesis in autism models using high-resolution genomic barcoding technologiesR01HG012357 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI KALHOR, REZA · 2022 to 2025
$2.1M
Role for ion conducting proteins in cortical malformation diseasesR00NS112604 · NINDS · NORTHWESTERN UNIVERSITY · PI SMITH, RICHARD S · 2023 to 2025
$715k
Resolving Spatiotemporal Determinants of Cell Specification in Corticogenesis with Latent Space MethodsR00NS122085 · NINDS · JOHNS HOPKINS UNIVERSITY · PI STEIN-O'BRIEN, GENEVIEVE LAUREN · 2023 to 2025
$697k
Role for ion conducting proteins in cortical malformation diseasesK99NS112604 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI SMITH, RICHARD S · 2019 to 2021
$276k
NHGRI NIH HHS R01 HG012357NICHD NIH HHS P50 HD105351NIMH NIH HHS RF1 MH121539NINDS NIH HHS K99 NS112604NINDS NIH HHS R00 NS112604NINDS NIH HHS R00 NS122085
6 · The paper itself

Abstract

The neocortex varies in size and complexity among mammals due to the tremendous variability in the number and diversity of neuronal subtypes across species. The increased cellular diversity is paralleled by the expansion of the pool of neocortical progenitors and the emergence of indirect neurogenesis during brain evolution. The molecular pathways that control these biological processes and are disrupted in neurological disorders remain largely unknown. Here we show that the transcription factors BRN1 and BRN2 have an evolutionary conserved function in neocortical progenitors to control their proliferative capacity and the switch from direct to indirect neurogenesis. Functional studies in mice and ferrets show that BRN1/2 act in concert with NOTCH and primary microcephaly genes to regulate progenitor behavior. Analysis of transcriptomics data from genetically modified macaques provides evidence that these molecular pathways are conserved in non-human primates. Our findings thus demonstrate that BRN1/2 are central regulators of gene expression programs in neocortical progenitors critical to determine brain size during evolution.

Indexed as

Gene Expression Regulation, DevelopmentalNeocortexNeural Stem CellsNeurogenesisPOU Domain FactorsAnimalsCell ProliferationFemaleFerretsHomeodomain ProteinsMacacaMaleMiceNerve Tissue ProteinsReceptors, NotchHomeodomain ProteinsMrg1 protein, mouseNerve Tissue ProteinsPou3f2 protein, mousePOU Domain FactorsReceptors, Notchtranscription factor Brn-2

Identifiers

PMID39271675
PMCPMC11399407

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.