Evidence map›Paper›PMID 39271666›Full record

ArticleNature communications2024

NOTCH3 p.Arg1231Cys is markedly enriched in South Asians and associated with stroke.

Juan Lorenzo Rodriguez-Flores, Shareef Khalid, Neelroop Parikshak, Asif Rasheed, Bin Ye, Manav Kapoor, Joshua Backman, Farshid Sepehrband, Silvio Alessandro Di Gioia, Sahar Gelfman and 39 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Macrophage WDFY3, a protector against autoimmunity.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors.

Juan Lorenzo Rodriguez-Flores *Regeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-0394-8062
Shareef Khalid *Columbia University, New York, NY, USA.
Neelroop ParikshakRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0003-2027-1871
Asif RasheedCenter for Non-Communicable Diseases, Karachi, Pakistan.
Bin YeRegeneron Genetics Center, Tarrytown, NY, USA.
Manav KapoorRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0001-6682-940X
Joshua BackmanRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0001-7262-0880
Farshid SepehrbandRegeneron Genetics Center, Tarrytown, NY, USA.
Silvio Alessandro Di GioiaRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Sahar GelfmanRegeneron Genetics Center, Tarrytown, NY, USA.
Tanima DeRegeneron Genetics Center, Tarrytown, NY, USA.
Nilanjana BanerjeeRegeneron Genetics Center, Tarrytown, NY, USA.
Deepika SharmaRegeneron Genetics Center, Tarrytown, NY, USA.
Hector MartinezRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Sofia CastanedaRye Country Day School, Rye, NY, USA.
David D'AmbrosioRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Xingmin A ZhangRegeneron Genetics Center, Tarrytown, NY, USA.
Pengcheng XunRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Ellen TsaiUniversity of California at Los Angeles, Los Angeles, CA, USA.
I-Chun TsaiRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Regeneron Genetics Center
Maleeha Zaman KhanCenter for Non-Communicable Diseases, Karachi, Pakistan.
Muhammad JahanzaibCenter for Non-Communicable Diseases, Karachi, Pakistan.ORCID 0000-0002-5101-8564
Muhammad Rehan MianCenter for Non-Communicable Diseases, Karachi, Pakistan.
Muhammad Bilal LiaqatCenter for Non-Communicable Diseases, Karachi, Pakistan.
Khalid MahmoodDow University of Health Sciences and Civil Hospital, Karachi, Pakistan.
Tanvir Us SalamLahore General Hospital, Lahore, Pakistan.
Muhammad HussainLahore General Hospital, Lahore, Pakistan.
Javed IqbalDepartment of Neurology, Allied Hospital, Faisalabad, Pakistan.
Faizan AslamDepartment of Neurology, Aziz Fatima Hospital, Faisalabad, Pakistan.
Michael N CantorRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-1074-1203
Gannie TzonevaRegeneron Genetics Center, Tarrytown, NY, USA.
John OvertonRegeneron Genetics Center, Tarrytown, NY, USA.
Jonathan MarchiniRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0003-0610-8322
Jeffrey G ReidRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0001-8645-4713
Aris BarasRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-6830-3396
Niek VerweijRegeneron Genetics Center, Tarrytown, NY, USA.
Luca A LottaRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-2619-5956
Giovanni CoppolaRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0003-2105-1061
Katia KaralisRegeneron Genetics Center, Tarrytown, NY, USA.
Aris EconomidesRegeneron Genetics Center, Tarrytown, NY, USA.ORCID 0000-0002-6508-8942
Sergio FazioRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.
Wolfgang LiedtkeRegeneron Pharmaceuticals Inc, Tarrytown, NY, USA.ORCID 0000-0003-4166-5394
John DaneshDepartment of Public Health and Primary Care, University of Cambridge, Cambridge, UK.
Ayeesha KamalSection of Neurology, Department of Medicine, Aga Khan University, Karachi, Pakistan.
Philippe FrossardCenter for Non-Communicable Diseases, Karachi, Pakistan.
Thomas ColemanRegeneron Genetics Center, Tarrytown, NY, USA.
Alan R Shuldiner *Regeneron Genetics Center, Tarrytown, NY, USA. alan.shuldiner@regeneron.com.ORCID 0000-0001-9921-4305
Danish Saleheen *Columbia University, New York, NY, USA. danish.saleheen@cncdpk.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic factors of stroke in South Asians are largely unexplored. Exome-wide sequencing and association analysis (ExWAS) in 75 K Pakistanis identified NM_000435.3(NOTCH3):c.3691 C > T, encoding the missense amino acid substitution p.Arg1231Cys, enriched in South Asians (alternate allele frequency = 0.58% compared to 0.019% in Western Europeans), and associated with subcortical hemorrhagic stroke [odds ratio (OR) = 3.39, 95% confidence interval (CI) = [2.26, 5.10], p = 3.87 × 10

Indexed as

Genetic Predisposition to DiseaseReceptor, Notch3StrokeAgedExome SequencingFemaleGene FrequencyHumansMagnetic Resonance ImagingMaleMiddle AgedMutation, MissensePakistanPolymorphism, Single NucleotideSouth Asian PeopleUK BiobankNOTCH3 protein, humanReceptor, Notch3

Identifiers

PMID39271666
PMCPMC11399414

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.