Evidence map›Paper›PMID 39269777›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Machine learning reveals the transcriptional regulatory network and circadian dynamics of

Yuan Yuan, Tahani Al Bulushi, Anand V Sastry, Cigdem Sancar, Richard Szubin, Susan S Golden, Bernhard O Palsson

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. EnhancedMarine drugs · 2026
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Yuan YuanShu Chien-Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA 92093.
Tahani Al BulushiShu Chien-Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA 92093.
Anand V SastryShu Chien-Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA 92093.
Cigdem SancarCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-7242-8757
Richard SzubinShu Chien-Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA 92093.
Susan S GoldenCenter for Circadian Biology, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-4264-7019
Bernhard O PalssonShu Chien-Gene Lay Department of Bioengineering, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0003-2357-6785

Funding

Undergraduate Summer Research Experience: Molecular and cellular mechanisms of circadian timekeeping in a prokaryote modelR35GM118290 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOLDEN, SUSAN S · 2016 to 2025
$6.7M
HHS | NIH | National Institute of General Medical Sciences (NIGMS) R35GM118290NIGMS NIH HHS R35 GM118290
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Circadian RhythmGene Expression Regulation, BacterialGene Regulatory NetworksMachine LearningSynechococcusBacterial ProteinsPhotosynthesisTranscriptomeBacterial Proteinscarbon fixationcircadian rhythmcyanobacteriamachine learningtranscriptional regulatory network

Identifiers

PMID39269777
PMCPMC11420160

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.