Evidence map›Paper›PMID 39268627›Full record

ArticleChembiochem : a European journal of chemical biology2024

The Multifunctional Preprotein Binding Domain of SecA.

Emmanouil Giotas, Stavroula Aikaterini Kaplani, Nikolaos Eleftheriadis

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Multifunctional Preprotein Binding Domain of SecA.Chembiochem : a European journal of chemical biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Emmanouil GiotasDepartment of Chemistry, University of Crete, Voutes, 70013, Heraklion, Greece.
Stavroula Aikaterini KaplaniDepartment of Chemistry, University of Crete, Voutes, 70013, Heraklion, Greece.
Nikolaos EleftheriadisDepartment of Chemistry, University of Crete, Voutes, 70013, Heraklion, Greece.ORCID 0000-0002-1738-6419

Funding

Empeirikeion FoundationEuropean Union - NextGenerationEU TAEDR-0535850Hellenic Foundation for Research and Innovation number: 15511National RecoveryResilience Plan Greece 2.0
6 · The paper itself

Abstract

Sec-pathway is the main protein secretion pathway in prokaryotes and is essential for their survival. The motor protein SecA is the main coordinator of the pathway in bacteria as it is has evolved to perform multiple tasks, acting like a "swiss army knife", from binding pre-proteins to altering its oligomeric and conformational states. This study focuses on the role of its Preprotein Binding Domain (PBD), which is a key protein module that identified in three conformational states (Wide-Open (WO), Open (O) and Closed (C)). A thorough analysis was conducted to identify PBD's inter- and intra-protomeric interactions, highlighting the most significant and conserved ones. Both crystallographic and biophysical data indicate that the WO state is the main during dimerization, while the monomeric structure can adopt all three states. C-tail, Stem

Indexed as

Protein BindingSecA ProteinsAdenosine TriphosphatasesBacterial ProteinsBinding SitesCrystallography, X-RayEscherichia coli ProteinsModels, MolecularProtein ConformationProtein DomainsSEC Translocation ChannelsAdenosine TriphosphatasesBacterial ProteinsEscherichia coli ProteinsSecA protein, E coliSecA ProteinsSEC Translocation ChannelsConformational statesPreprotein binding domainProtein secretionSecASec-pathway

Identifiers

PMID39268627
PMCPMC11610655

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.