Evidence map›Paper›PMID 39266981›Full record

ArticleBMC oral health2024

Discovering common pathogenetic processes between periodontitis and Alzheimer's disease by bioinformatics and system biology approach.

Fei Ge, Yang Zhao, Jinren Zheng, Qun Xiang, Pei Luo, Lu Zhu, Huiyu He

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Article in BMC oral health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fei Ge *Department of Oral Implantology and Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University (The Affiliated Stomatology Hospital of Xinjiang Medical University, Urumqi, 830054, People's Republic of China.
Yang Zhao *Department of Pacing and Electrophysiology, The First Affiliated Hospital of Xinjiang Medical University, Urumqi, 830054, People's Republic of China.
Jinren ZhengDepartment of Clinical Laboratory, Eyes ENT Hospital of Urumqi, Urumqi, 830002, People's Republic of China.
Qun XiangDepartment of Stomatology, The Affiliated Huanan Hospital of Shenzhen University, Shenzhen, 518111, People's Republic of China.
Pei LuoDepartment of Stomatology, The Affiliated Huanan Hospital of Shenzhen University, Shenzhen, 518111, People's Republic of China.
Lu ZhuDepartment of Stomatology, The Affiliated Huanan Hospital of Shenzhen University, Shenzhen, 518111, People's Republic of China.
Huiyu HeDepartment of Oral Implantology and Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University (The Affiliated Stomatology Hospital of Xinjiang Medical University, Urumqi, 830054, People's Republic of China. hehuiyu01@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThere is increasing evidence that inflammation plays a key role in the pathophysiology of periodontitis (PT) and Alzheimer's disease (AD), but the roles of inflammation in linking PT and AD are not clear. Our aim is to analyze the potential molecular mechanisms between these two diseases using bioinformatics and systems biology approaches.

methodsTo elucidate the link between PT and AD, we selected shared genes (SGs) with gene-disease-association scores of ≥ 0.1 from the Disease Gene Network (DisGeNET) database, followed by extracting the hub genes. Based on these genes, we constructed gene ontology (GO) enrichment analysis, pathway enrichment analysis, protein-protein interaction (PPI) networks, transcription factors (TFs)-gene networks, microRNAs (miRNAs)-gene regulatory networks, and gene-disease association analyses. Finally, the Drug Signatures database (DSigDB) was utilized to predict candidate molecular drugs related to hub genes.

resultsA total of 21 common SGs between PT and AD were obtained. Cell cytokine activity, inflammatory response, and extracellular membrane were the most important enriched items in GO analysis. Interleukin-10 Signaling, LTF Danger Signal Response Pathway, and RAGE Pathway were identified as important shared pathways. IL6, IL10, IL1B, TNF, IFNG, CXCL8, CCL2, MMP9, TLR4 were identified as hub genes. Both shared pathways and hub genes are closely related to endoplasmic reticulum (ER) stress and mitochondrial dysfunction. Importantly, glutathione, simvastatin, and dexamethasone were identified as important candidate drugs for the treatment of PT and AD.

conclusionsThere is a close link between PT and AD pathogenesis, which may involve in the inflammation, ER and mitochondrial function.

Indexed as

Alzheimer DiseaseComputational BiologyPeriodontitisSystems BiologyGene OntologyGene Regulatory NetworksHumansMicroRNAsProtein Interaction MapsMicroRNAsAlzheimer’s diseaseEndoplasmic reticulum stressHub geneInflammationMitochondrial dysfunctionPeriodontitis

Identifiers

PMID39266981
PMCPMC11391628

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.