Evidence map›Paper›PMID 39266968›Full record

ArticleBMC plant biology2024

Identification, characterization, and expression analysis of WRKY transcription factors in Cardamine violifolia reveal the key genes involved in regulating selenium accumulation.

Xiao-Meng Liu, Zhi-Gang Yuan, Shen Rao, Wei-Wei Zhang, Jia-Bao Ye, Shui-Yuan Cheng, Feng Xu

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Growth Traits and Electrophysiological Responses ofPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiao-Meng LiuSchool of Modern Industry for Selenium Science and Engineering, National R&D Center for Se-rich Agricultural Products Processing Technology, Wuhan Polytechnic University, Wuhan, Hubei, 430048, China.
Zhi-Gang YuanSchool of Modern Industry for Selenium Science and Engineering, National R&D Center for Se-rich Agricultural Products Processing Technology, Wuhan Polytechnic University, Wuhan, Hubei, 430048, China.
Shen RaoSchool of Modern Industry for Selenium Science and Engineering, National R&D Center for Se-rich Agricultural Products Processing Technology, Wuhan Polytechnic University, Wuhan, Hubei, 430048, China.
Wei-Wei ZhangCollege of Horticulture and Gardening, Yangtze University, Jingzhou, Hubei, 434025, China.
Jia-Bao YeCollege of Horticulture and Gardening, Yangtze University, Jingzhou, Hubei, 434025, China.
Shui-Yuan ChengSchool of Modern Industry for Selenium Science and Engineering, National R&D Center for Se-rich Agricultural Products Processing Technology, Wuhan Polytechnic University, Wuhan, Hubei, 430048, China.
Feng XuCollege of Horticulture and Gardening, Yangtze University, Jingzhou, Hubei, 434025, China. xufeng198@126.com.

Funding

Key Research and Development Program of Hubei Province, China 2023BBB065the Dawning Plan Project of Knowledge Innovation Special Project of Wuhan City 2023020201020456the Doctoral Research Funding Project of Wuhan Polytechnic University 2023RZ014
6 · The paper itself

Abstract

backgroundCardamine violifolia is a significant Brassicaceae plant known for its high selenium (Se) accumulation capacity, serving as an essential source of Se for both humans and animals. WRKY transcription factors play crucial roles in plant responses to various biotic and abiotic stresses, including cadmium stress, iron deficiency, and Se tolerance. However, the molecular mechanism of CvWRKY in Se accumulation is not completely clear.

resultsIn this study, 120 WRKYs with conserved domains were identified from C. violifolia and classified into three groups based on phylogenetic relationships, with Group II further subdivided into five subgroups. Gene structure analysis revealed WRKY variations and mutations within the CvWRKYs. Segmental duplication events were identified as the primary driving force behind the expansion of the CvWRKY family, with numerous stress-responsive cis-acting elements found in the promoters of CvWRKYs. Transcriptome analysis of plants treated with exogenous Se and determination of Se levels revealed a strong positive correlation between the expression levels of CvWRKY034 and the Se content. Moreover, CvWRKY021 and CvWRKY099 exhibited high homology with AtWRKY47, a gene involved in regulating Se accumulation in Arabidopsis thaliana. The WRKY domains of CvWRKY021 and AtWRKY47 were highly conserved, and transcriptome data analysis revealed that CvWRKY021 responded to Na

conclusionsThe results of this study elucidate the evolution of CvWRKYs in the C. violifolia genome and provide valuable resources for further understanding the functional characteristics of WRKYs related to Se hyperaccumulation in C. violifolia.

Indexed as

CardamineGene Expression Regulation, PlantPhylogenyPlant ProteinsSeleniumTranscription FactorsGene Expression ProfilingGenes, PlantPlant ProteinsSeleniumTranscription FactorsCardamine violifoliaGene expressionGenome-wide analysisSeleniumWRKY transcription factors

Identifiers

PMID39266968
PMCPMC11396617

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.