Evidence map›Paper›PMID 39263016›Full record

ArticleTranslational lung cancer research2024

Assessing the transportability of radiomic models for lung cancer diagnosis: commercial

David Xiao, Michael N Kammer, Heidi Chen, Palina Woodhouse, Kim L Sandler, Anna E Baron, David O Wilson, Ehab Billatos, Jiantao Pu, Fabien Maldonado and 2 more

Abstract read
In one paragraph

Article in Translational lung cancer research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

David XiaoDepartment of Thoracic Surgery, Vanderbilt University Medical Center, Nashville, TN, USA.
Michael N KammerDivision of Allergy, Pulmonary, and Critical Care Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Heidi ChenDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.
Palina WoodhouseDepartment of Thoracic Surgery, Vanderbilt University Medical Center, Nashville, TN, USA.
Kim L SandlerDepartment of Radiology, Vanderbilt University Medical Center, Nashville, TN, USA.
Anna E BaronDepartment of Biostatistics and Informatics, Colorado School of Public Health, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
David O WilsonDepartment of Radiology and Bioengineering, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Ehab BillatosSection of Pulmonary and Critical Care, Department of Medicine, Boston University, Boston, MA, USA.
Jiantao PuDepartment of Radiology and Bioengineering, School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Fabien MaldonadoDivision of Allergy, Pulmonary, and Critical Care Medicine, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Stephen A DeppenDepartment of Thoracic Surgery, Vanderbilt University Medical Center, Nashville, TN, USA.
Eric L GroganDepartment of Thoracic Surgery, Vanderbilt University Medical Center, Nashville, TN, USA.

Funding

Validation of Biomarkers of Risk for the Early Detection of Lung CancerU01CA152662 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DEPPEN, STEPHEN, GROGAN, ERIC L · 2010 to 2025
$12.8M
Interdisciplinary Training Program in Lung ResearchT32HL094296 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Ray Stokes Peebles · 2008 to 2026
$6.3M
Clinical Utility of Biomarkers Driven Management of Indeterminate Pulmonary NodulesR01CA252964 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Eric L Grogan, Alexander Mark Kaizer · 2021 to 2026
$3.3M
NCI NIH HHS R01 CA252964NCI NIH HHS U01 CA152662NHLBI NIH HHS T32 HL094296
6 · The paper itself

Abstract

Background: Radiomics has shown promise in improving malignancy risk stratification of indeterminate pulmonary nodules (IPNs) with many platforms available, but with no head-to-head comparisons. This study aimed to evaluate transportability of radiomic models across platforms by comparing performances of a commercial radiomic feature extractor (HealthMyne) with an open-source extractor (PyRadiomics) on diagnosis of lung cancer in IPNs. Methods: A commercial radiomic feature extractor was used to segment IPNs from computed tomography (CT) scans, and a previously validated radiomic model based on commercial features was used as baseline (ComRad). Using same segmentation masks, PyRadiomics, an open-source feature extractor was used to build three open-source radiomic models (OpenRad) using different methods: Results: ComRad AUC was 0.76 [95% confidence interval (CI): 0.71-0.82], and OpenRad AUC was 0.75 (95% CI: 0.69-0.81) for LASSO model, 0.74 (95% CI: 0.68-0.79) for Spearman's correlation, and 0.71 (95% CI: 0.65-0.77) for IBSI. Mayo scores were added to OpenRad LASSO model, which performed best, forming open-source ClinRad model with AUC of 0.80 (95% CI: 0.74-0.86), identical to commercial ClinRad's AUC. Both ClinRad models showed clinical improvement compared to Mayo alone, with commercial ClinRad achieving cNRI of 0.09 (95% CI: 0.02-0.15) for benign and 0.07 (95% CI: 0.00-0.13) for malignant, and open-source ClinRad achieving cNRI of 0.09 (95% CI: 0.02-0.15) for benign and 0.06 (95% CI: 0.00-0.12) for malignant. Conclusions: Transportability of radiomic models across platforms directly does not conserve performance, but radiomic platforms can provide equivalent results when building

Indexed as

imagingindeterminate pulmonary nodules (IPNs)lung cancerRadiomics

Identifiers

PMID39263016
PMCPMC11384473

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.