Evidence map›Paper›PMID 39261718›Full record

ArticleNature cell biology2024

The Polycomb system sustains promoters in a deep OFF state by limiting pre-initiation complex formation to counteract transcription.

Aleksander T Szczurek, Emilia Dimitrova, Jessica R Kelley, Neil P Blackledge, Robert J Klose

Abstract read
In one paragraph

Article in Nature cell biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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  5. Article
  6. Review
  7. Polycomb-mediated 3D chromatin interactions in gene regulation.Current opinion in genetics & development · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Research square · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Aleksander T SzczurekDepartment of Biochemistry, University of Oxford, Oxford, UK. aleksander.szczurek@bioch.ox.ac.uk.ORCID 0000-0002-7363-5985
Emilia DimitrovaDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0001-5669-1240
Jessica R KelleyDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0003-1255-4476
Neil P BlackledgeDepartment of Biochemistry, University of Oxford, Oxford, UK.
Robert J KloseDepartment of Biochemistry, University of Oxford, Oxford, UK. rob.klose@bioch.ox.ac.uk.ORCID 0000-0002-8726-7888

Funding

Wellcome TrustWellcome Trust (Wellcome) 209400/Z/17/Z
6 · The paper itself

Abstract

The Polycomb system has fundamental roles in regulating gene expression during mammalian development. However, how it controls transcription to enable gene repression has remained enigmatic. Here, using rapid degron-based depletion coupled with live-cell transcription imaging and single-particle tracking, we show how the Polycomb system controls transcription in single cells. We discover that the Polycomb system is not a constitutive block to transcription but instead sustains a long-lived deep promoter OFF state, which limits the frequency with which the promoter can enter into a transcribing state. We demonstrate that Polycomb sustains this deep promoter OFF state by counteracting the binding of factors that enable early transcription pre-initiation complex formation and show that this is necessary for gene repression. Together, these important discoveries provide a rationale for how the Polycomb system controls transcription and suggests a universal mechanism that could enable the Polycomb system to constrain transcription across diverse cellular contexts.

Indexed as

Polycomb-Group ProteinsPromoter Regions, GeneticTranscription, GeneticAnimalsGene Expression RegulationHumansMicePolycomb Repressive Complex 1Transcription Initiation, GeneticPolycomb-Group ProteinsPolycomb Repressive Complex 1

Identifiers

PMID39261718
PMCPMC11469961

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.