ArticleNature methods2024
Navigate: an open-source platform for smart light-sheet microscopy.
Abstract readLetter
In one paragraph
Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
19 citing papers in PubMed.
- Smart event-triggered MINFLUX microscopy to catch and follow rare events.Nature communications · 2026Article
- Altair-dvOPM: an open-access platform for large-field three-dimensional tissue imaging.bioRxiv : the preprint server for biology · 2026Article
- ClearScope: A Fully Integrated Light-Sheet Theta Microscope for Sub-Micron-Resolution Imaging Without Lateral Size Constraints.Journal of imaging · 2026Article
- Review
- Article
- A flexible framework for automated STED super-resolution microscopy.Scientific reports · 2026Article
- Visualizing the multidimensional landscape of biological variation in modern microscopy.Frontiers in bioinformatics · 2026Article
- Closed-loop optogenetic control of cell biology enables outcome-driven microscopy.Nature communications · 2025Article
- Altair-LSFM A High-Resolution, Easy-to-Build Light-Sheet Microscope for Sub-Cellular Imaging.bioRxiv : the preprint server for biology · 2025Article
- Universal consensus 3D segmentation of cells from 2D segmented stacks.Nature methods · 2025Article
- Multi-immersion Oblique Plane Microscope (miOPM): A reconfigurable platform for high-resolution Light-Sheet Fluorescence Microscopy.bioRxiv : the preprint server for biology · 2025Article
- Feature-driven whole-tissue imaging with subcellular resolution.Cell reports methods · 2025Article
- Three-dimensional assessments are necessary to determine the true, spatially resolved composition of tissues.Cell reports methods · 2025Article
- Active remote focus stabilization in oblique plane microscopy.Biomedical optics express · 2025Article
- AI-based hardware and software tools in microscopy to boost research in immunology and virology.Frontiers in immunology · 2025Review
- Model based optimization for refractive index mismatched light sheet imaging.Optics express · 2024Article
- Mechanically sheared axially swept light-sheet microscopy.Biomedical optics express · 2024Article
- Adaptive optics in an oblique plane microscope.Biomedical optics express · 2024Article
- Adaptive Optics in an Oblique Plane Microscope.bioRxiv : the preprint server for biology · 2024Article
Corrections and comments
- Update of
Authors and funding
18 authors.
Zach Marin *Lyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0001-5341-9911
Xiaoding Wang *Lyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.
Dax W CollisonLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0009-0003-3973-5055
Conor McFaddenLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-3848-2848
Jinlong LinLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.
Hazel M BorgesLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0009-0006-5834-5310
Bingying ChenLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.
Dushyant MehraLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.
Qionghua ShenLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-2808-4408
Seweryn GałeckiLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-7020-0804
Stephan DaetwylerLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-7444-4734
Steven J SheppardCenter for Biological Physics and Department of Physics, Arizona State University, Tempe, AZ, USA.
Phu ThienCenter for Biological Physics and Department of Physics, Arizona State University, Tempe, AZ, USA.ORCID http://orcid.org/0009-0001-3961-7134
Baylee A PorterDepartment of Internal Medicine, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-9503-6537
Suzanne D ConzenDepartment of Internal Medicine, UT Southwestern Medical Center, Dallas, TX, USA.
Douglas P ShepherdCenter for Biological Physics and Department of Physics, Arizona State University, Tempe, AZ, USA.
Reto FiolkaLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-4636-5000
Kevin M DeanLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX, USA. Kevin.Dean@UTSouthwestern.edu.ORCID http://orcid.org/0000-0003-0839-2320
Funding
Technical Development Unit 2: Intelligent Hyperspectral Imaging of Subcellular Molecular States at the Whole Organ LevelU54CA268072 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Kevin Michael Dean · 2021 to 2026
$9.1MUTSW-UNC Center for Cell Signaling AnalysisRM1GM145399 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Kevin Michael Dean, Klaus M. Hahn · 2022 to 2026
$6.2MTransformative microscopes to image across spatiotemporal scalesR35GM133522 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2019 to 2026
$3.1MEstrogen and glucocorticoid receptor crosstalk in ER+ breastR01CA238519 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CONZEN, SUZANNE DANIELA · 2019 to 2024
$1.7MCancer Prevention and Research Institute of Texas (Cancer Prevention Research Institute of Texas) RR1900371NCI NIH HHS R01 CA238519NCI NIH HHS U54 CA268072NIGMS NIH HHS R35 GM133522NIGMS NIH HHS RM1 GM145399U.S. Department of Health & Human Services | National Institutes of Health (NIH) R35GM133522U.S. Department of Health & Human Services | National Institutes of Health (NIH) RM1GM145399U.S. Department of Health & Human Services | National Institutes of Health (NIH) U54CA268072U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA238519
Abstract
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.