Evidence map›Paper›PMID 39261602›Full record

ArticleLeukemia2024

The non-canonical BAF chromatin remodeling complex is a novel target of spliceosome dysregulation in SF3B1-mutated chronic lymphocytic leukemia.

Daniel Hägerstrand, Blaž Oder, Diego Cortese, Ying Qu, Amrei Binzer-Panchal, Cecilia Österholm, Teresa Del Peso Santos, Leily Rabbani, Hassan Foroughi Asl, Aron Skaftason and 26 more

Abstract read
In one paragraph

Article in Leukemia, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. RNA splicing in health and disease.Molecular biomedicine · 2026
    Review
  3. Article
  4. Long-Read Sequencing Reveals RNA Splicing Complexity in Human Diseases.Computational and structural biotechnology journal · 2026
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Daniel Hägerstrand *Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-7270-0776
Blaž Oder *Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-7984-3104
Diego CorteseDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Ying QuDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Amrei Binzer-PanchalDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-0472-0609
Cecilia ÖsterholmDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Teresa Del Peso SantosDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Leily RabbaniDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Hassan Foroughi AslDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Aron SkaftasonDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Viktor LjungströmDepartment of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
August LundholmDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Maria KoutroumaniInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thessaloniki, Greece.
Zahra HaiderDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Cecilia JylhäDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
John MollstedtDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Larry MansouriDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Karla PlevovaDepartment of Internal Medicine - Hematology and Oncology, Medical Faculty, Masaryk University and University Hospital Brno, Brno, Czech Republic.
Andreas AgathangelidisInstitute of Applied Biosciences, Centre for Research and Technology Hellas, Thessaloniki, Greece.ORCID 0000-0002-8467-7945
Lydia ScarfòUniversità Vita-Salute San Raffaele, Milan, Italy.ORCID 0000-0002-0844-0989
Marine ArmandDepartment of Hematology, Hospital Pitie-Salpetriere, Sorbonne University, Paris, France.ORCID 0000-0001-8906-3128
Alice F MuggenDepartment of Immunology, Erasmus MC, University Medical Center Rotterdam, Rotterdam, Netherlands.
Neil E KayDivision of Hematology, Department of Internal Medicine, Mayo Clinic, Rochester, MN, USA.ORCID 0000-0002-5951-5055
Tait ShanafeltDivision of Hematology, Department of Medicine, Stanford University Medical Center, Stanford, CA, USA.
Davide RossiDepartment of Hematology, Oncology Institute of Southern Switzerland and Institute of Oncology Research, Bellinzona, Switzerland.
Lukas M OrreDepartment of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-0384-1003
Sarka PospisilovaDepartment of Internal Medicine - Hematology and Oncology, Medical Faculty, Masaryk University and University Hospital Brno, Brno, Czech Republic.ORCID 0000-0001-7136-2680
Konstantin BarylyukDepartment of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-3580-0345
Frederic DaviDepartment of Hematology, Hospital Pitie-Salpetriere, Sorbonne University, Paris, France.
Mattias VesterlundDepartment of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-9471-6592
Anton W LangerakDepartment of Immunology, Erasmus MC, University Medical Center Rotterdam, Rotterdam, Netherlands.ORCID 0000-0002-2078-3220
Janne LehtiöDepartment of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0002-8100-9562
Paolo GhiaUniversità Vita-Salute San Raffaele, Milan, Italy.ORCID 0000-0003-3750-7342
Kostas StamatopoulosDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.ORCID 0000-0001-8529-640X
Lesley-Ann SuttonDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Richard RosenquistDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden. richard.rosenquist@ki.se.ORCID 0000-0002-0211-8788

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SF3B1 mutations are recurrent in chronic lymphocytic leukemia (CLL), particularly enriched in clinically aggressive stereotyped subset #2. To investigate their impact, we conducted RNA-sequencing of 18 SF3B1

Indexed as

Chromatin Assembly and DisassemblyLeukemia, Lymphocytic, Chronic, B-CellMutationPhosphoproteinsRNA Splicing FactorsSpliceosomesAlternative SplicingBromodomain Containing ProteinsHumansTranscription FactorsBRD9 protein, humanBromodomain Containing ProteinsPhosphoproteinsRNA Splicing FactorsSF3B1 protein, humanTranscription Factors

Identifiers

PMID39261602
PMCPMC11518989

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.