Evidence map›Paper›PMID 39261501›Full record

ArticleScientific reports2024

A reference genome for the Harpy Eagle reveals steady demographic decline and chromosomal rearrangements in the origin of Accipitriformes.

Lucas Eduardo Costa Canesin, Sibelle T Vilaça, Renato R M Oliveira, Farooq Al-Ajli, Alan Tracey, Ying Sims, Giulio Formenti, Olivier Fedrigo, Aureo Banhos, Tania M Sanaiotti and 6 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Multidirectional Chromosomal Painting in the Harpy Eagle (Animals : an open access journal from MDPI · 2026
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Lucas Eduardo Costa CanesinInstituto Tecnológico Vale - Desenvolvimento Sustentável (ITV-DS), Belém, Brazil.
Sibelle T VilaçaInstituto Tecnológico Vale - Desenvolvimento Sustentável (ITV-DS), Belém, Brazil.
Renato R M OliveiraInstituto Tecnológico Vale - Desenvolvimento Sustentável (ITV-DS), Belém, Brazil.
Farooq Al-AjliRockefeller University, New York, USA.
Alan TraceyRockefeller University, New York, USA.
Ying SimsRockefeller University, New York, USA.
Giulio FormentiRockefeller University, New York, USA.
Olivier FedrigoRockefeller University, New York, USA.
Aureo BanhosUniversidade Federal do Espírito Santo (UFES), Alegre, Brazil.
Tania M SanaiottiInstituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil.
Izeni P FariasUniversidade Federal do Amazonas (UFAM), Manaus, Brazil.
Erich D JarvisRockefeller University, New York, USA.
Guilherme OliveiraInstituto Tecnológico Vale - Desenvolvimento Sustentável (ITV-DS), Belém, Brazil.
Tomas HrbekUniversidade Federal do Amazonas (UFAM), Manaus, Brazil.
Vera SolferiniUniversidade Estadual de Campinas (Unicamp), Campinas, Brazil.
Alexandre AleixoInstituto Tecnológico Vale - Desenvolvimento Sustentável (ITV-DS), Belém, Brazil. alexandre.aleixo@itv.org.

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 309243/2023-8Conselho Nacional de Desenvolvimento Científico e Tecnológico 316531/2023-5Conselho Nacional de Desenvolvimento Científico e Tecnológico 316532/2023-1
6 · The paper itself

Abstract

The Harpy Eagle (Harpia harpyja) is an iconic species that inhabits forested landscapes in Neotropical regions, with decreasing population trends mainly due to habitat loss, and currently classified as vulnerable. Here, we report on a chromosome-scale genome assembly for a female individual combining long reads, optical mapping, and chromatin conformation capture reads. The final assembly spans 1.35 Gb, with N50

Indexed as

EaglesGenomeAnimalsDNA Transposable ElementsEvolution, MolecularFemaleGenomicsPhylogenyRetroelementsDNA Transposable ElementsRetroelementsAccipitridaeDemographic declineGenome architectureGenome assemblyTransposable elements

Identifiers

PMID39261501
PMCPMC11390914

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.