Evidence map›Paper›PMID 39259296›Full record

ArticleThe Plant cell2024

Plant Phytochrome Interactions Decode Light and Temperature Signals.

Chengwei Yi, Uwe Gerken, Kun Tang, Michael Philipp, Matias D Zurbriggen, Jürgen Köhler, Andreas Möglich

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Circular dichroism spectroscopy reveals multiple phytochrome photoproducts in equilibrium.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2025
    Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chengwei YiDepartment of Biochemistry, University of Bayreuth, 95447 Bayreuth, Germany.ORCID 0000-0002-2167-4536
Uwe GerkenLehrstuhl für Spektroskopie weicher Materie, Universität Bayreuth, 95447 Bayreuth, Germany.ORCID 0000-0002-6447-2803
Kun TangInstitute of Synthetic Biology and CEPLAS, Heinrich Heine University Düsseldorf, 40225 Düsseldorf, Germany.ORCID 0000-0002-4796-9869
Michael PhilippLehrstuhl für Spektroskopie weicher Materie, Universität Bayreuth, 95447 Bayreuth, Germany.ORCID 0009-0007-8717-7317
Matias D ZurbriggenInstitute of Synthetic Biology and CEPLAS, Heinrich Heine University Düsseldorf, 40225 Düsseldorf, Germany.ORCID 0000-0002-3523-2907
Jürgen KöhlerLehrstuhl für Spektroskopie weicher Materie, Universität Bayreuth, 95447 Bayreuth, Germany.ORCID 0000-0002-4214-4008
Andreas MöglichDepartment of Biochemistry, University of Bayreuth, 95447 Bayreuth, Germany.ORCID 0000-0002-7382-2772

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant phytochromes perceive red and far-red light to elicit adaptations to the changing environment. Downstream physiological responses revolve around red-light-induced interactions with phytochrome-interacting factors (PIF). Phytochromes double as thermoreceptors, owing to the pronounced temperature dependence of thermal reversion from the light-adapted Pfr to the dark-adapted Pr state. Here, we assess whether thermoreception may extend to the phytochrome:PIF interactions. While the association between Arabidopsis (Arabidopsis thaliana) PHYTOCHROME B (PhyB) and several PHYTOCHROME-INTERACTING FACTOR (PIF) variants moderately accelerates with temperature, the dissociation does more so, thus causing net destabilization of the phytochrome:PIF complex. Markedly different temperature profiles of PIF3 and PIF6 might underlie stratified temperature responses in plants. Accidentally, we identify a photoreception mechanism under strong continuous light, where the extent of phytochrome:PIF complexation decreases with red-light intensity rather than increases. Mathematical modeling rationalizes this attenuation mechanism and ties it to rapid red-light-driven Pr⇄Pfr interconversion and complex dissociation out of Pr. Varying phytochrome abundance, e.g., during diurnal and developmental cycles, and interaction dynamics, e.g., across different PIFs, modify the nature and extent of attenuation, thus permitting light-response profiles more malleable than possible for the phytochrome Pr⇄Pfr interconversion alone. Our data and analyses reveal a photoreception mechanism with implications for plant physiology, optogenetics, and biotechnological applications.

Indexed as

fluorescenceoptogeneticsphotobiologyphytochromeplant physiologyprotein-protein interactionsensory photoreceptorsignal transduction

Identifiers

PMID39259296
PMCPMC11638003

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.