Evidence map›Paper›PMID 39257805›Full record

ArticlebioRxiv : the preprint server for biology2024

Regulatory network analysis of

Giovanni Valenti, Pasquale Laise, Ryota Takahashi, Feijing Wu, Tuo Ruan, Alessandro Vasciaveo, Zhengyu Jiang, Masaki Sunagawa, Moritz Middelhoff, Henrik Nienhüser and 6 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors.

Giovanni ValentiDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Pasquale LaiseDepartment of Systems Biology, Columbia University, New York, New York, USA.ORCID 0000-0003-1469-4704
Ryota TakahashiDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Feijing WuDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Tuo RuanDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Alessandro VasciaveoDepartment of Systems Biology, Columbia University, New York, New York, USA.
Zhengyu JiangDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Masaki SunagawaDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Moritz MiddelhoffKlinik und Poliklinik für Innere Medizin II, Klinikum rechts der Isar, TU Munich, Germany.
Henrik NienhüserDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Na FuDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Ermanno MalagolaDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.
Yoku HayakawaGraduate School of Medicine, Department of Gastroenterology, The University of Tokyo, Tokyo, Japan.
Alina C IugaDepartment of Pathology and Cell Biology, Columbia University, New York, New York, USA.
Andrea CalifanoDepartment of Systems Biology, Columbia University, New York, New York, USA.
Timothy C WangDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University, New York, New York, USA.

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
SToP Cancer SPORE: Developmental Research ProgramP50CA257911 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Jen Jen Yeh · 2022 to 2026
$12.9M
Predicting Cancer Cell Response to Endogenous and Exogenous Perturbations at the Single Cell LevelR35CA197745 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ANDREA CALIFANO · 2015 to 2026
$11.5M
The Role of Stem Cells and the Microenvironment in Gastrointestinal CancersR35CA210088 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Timothy Cragin Wang · 2017 to 2026
$10.2M
The Organoid and Cell Culture CoreP30DK132710 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Robert F. Schwabe · 2022 to 2026
$7.2M
Understanding stem cell heterogeneity and niche function in intestinal regeneration after irradiationU01DK103155 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GUHA, CHANDAN, WANG, TIMOTHY CRAGIN · 2014 to 2023
$4.4M
High-performance compute cluster for biomedical computingS10OD012351 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2012 to 2012
$2.0M
Gastrin Regulation of Gastric Antral Stem and Corpus Progenitor CellsR01DK128195 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WANG, TIMOTHY CRAGIN · 2021 to 2024
$2.0M
NCI NIH HHS P30 CA013696NCI NIH HHS P50 CA257911NCI NIH HHS R35 CA197745NCI NIH HHS R35 CA210088NIDDK NIH HHS P30 DK132710NIDDK NIH HHS R01 DK128195NIDDK NIH HHS U01 DK103155NIH HHS S10 OD012351
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID39257805
PMCPMC11383664

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.