Evidence map›Paper›PMID 39256403›Full record

ArticleNature communications2024

Genomic and immune heterogeneity of multiple synchronous lung adenocarcinoma at different developmental stages.

Yue Zhao, Jian Gao, Jun Wang, Fanfan Fan, Chao Cheng, Danwen Qian, Ran Guo, Yang Zhang, Ting Ye, Marcellus Augustine and 24 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Yue Zhao *Departments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China. yuezhao97@outlook.com.ORCID 0000-0003-3645-2634
Jian Gao *Departments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.ORCID 0000-0002-0446-7471
Jun Wang *School of Life Sciences, Fudan University, Shanghai, China.ORCID 0009-0005-4877-0930
Fanfan Fan *Departments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Chao Cheng *Department of Thoracic Surgery, West China Hospital of Sichuan University, Chengdu, Sichuan, China.
Danwen Qian *Cancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, UK.ORCID 0000-0002-6209-0764
Ran GuoDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Yang ZhangDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Ting YeDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Marcellus AugustineCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, UK.
Yicong LinDepartment of Oncology, Shanghai Medical College, Fudan University, Shanghai, China.
Jun ShangDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.ORCID 0000-0002-5767-1492
Hang LiDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Yunjian PanDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Qingyuan HuangDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Haiqing ChenDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Han HanDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Zhendong GaoDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Qiming WangSchool of Life Sciences, Fudan University, Shanghai, China.
Shiyue ZhangSchool of Life Sciences, Fudan University, Shanghai, China.
Mou ZhangSchool of Life Sciences, Fudan University, Shanghai, China.
Fangqiu FuDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Yueren YanDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Shanila Fernandez PatelCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, UK.
Roberto VendraminCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, UK.ORCID 0000-0001-7191-4887
Hui YuanDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Yawei ZhangDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Jiaqing XiangDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Hong HuDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.
Yihua SunDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China.ORCID 0000-0002-5287-0601
Yuan LiDepartment of Oncology, Shanghai Medical College, Fudan University, Shanghai, China.ORCID 0000-0001-9338-2463
Kevin LitchfieldCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, UK. k.litchfield@ucl.ac.uk.ORCID 0000-0002-3725-0914
Zhiwei CaoInternational Human Phenome Institutes (Shanghai), Shanghai, China. zwcao@fudan.edu.cn.ORCID 0000-0003-1165-1928
Haiquan ChenDepartments of Thoracic Surgery and State Key Laboratory of Genetic Engineering, Fudan University Shanghai Cancer Center, Shanghai, China. hqchen1@yahoo.com.ORCID 0000-0001-7846-257X

Funding

National Natural Science Foundation of China (National Science Foundation of China) 81930073National Natural Science Foundation of China (National Science Foundation of China) 82203037
6 · The paper itself

Abstract

Multiple synchronous lung cancers (MSLCs) constitute a unique subtype of lung cancer. To explore the genomic and immune heterogeneity across different pathological stages of MSLCs, we analyse 16 MSLCs from 8 patients using single-cell RNA-seq, single-cell TCR sequencing, and bulk whole-exome sequencing. Our investigation indicates clonally independent tumours with convergent evolution driven by shared driver mutations. However, tumours from the same individual exhibit few shared mutations, indicating independent origins. During the transition from pre-invasive to invasive adenocarcinoma, we observe a shift in T cell phenotypes characterized by increased Treg cells and exhausted CD8

Indexed as

Adenocarcinoma of LungLung NeoplasmsMutationSingle-Cell AnalysisAgedCD8-Positive T-LymphocytesExome SequencingFemaleGenetic HeterogeneityGenomicsHumansMaleMiddle AgedNeoplasms, Multiple PrimaryReceptors, Antigen, T-CellT-Lymphocytes, RegulatoryReceptors, Antigen, T-Cell

Identifiers

PMID39256403
PMCPMC11387495

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.