Evidence map›Paper›PMID 39256363›Full record

ArticleNature communications2024

RING1 missense variants reveal sensitivity of DNA damage repair to H2A monoubiquitination dosage during neurogenesis.

C W Ryan, S L Regan, E F Mills, B T McGrath, E Gong, Y T Lai, J B Sheingold, K Patel, T Horowitz, A Moccia and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Research square · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

C W RyanCellular and Molecular Biology Program, University of Michigan Medical School, Ann Arbor, MI, USA.ORCID 0000-0001-7476-9099
S L ReganDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
E F MillsDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
B T McGrathDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
E GongDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
Y T LaiDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
J B SheingoldDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
K PatelDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.ORCID 0009-0008-2386-9258
T HorowitzDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
A MocciaDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.ORCID 0000-0003-2255-367X
Y C TsanDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
A SrivastavaDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, USA.
S L BielasCellular and Molecular Biology Program, University of Michigan Medical School, Ann Arbor, MI, USA. sbielas@umich.edu.ORCID 0000-0003-0567-5632

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
PREDOCTORAL TRAINING IN GENETICST32GM007544 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MORAN, JOHN V. · 1985 to 2022
$11.3M
Role of histone ubiquitination in neurodevelopment and diseaseR01NS101597 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BIELAS, STEPHANIE LEE · 2018 to 2022
$2.0M
PRC1-dependent H2A Monoubiquitination During Human CorticogenesisF31NS127551 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RYAN, CHARLES WILLIAM · 2023 to 2024
$58k
NIGMS NIH HHS T32 GM007315NIGMS NIH HHS T32 GM007544NIGMS NIH HHS T32 GM007863NINDS NIH HHS F31 NS127551NINDS NIH HHS R01 NS101597U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R01AWD010411U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) F31NS127551U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01NS101597
6 · The paper itself

Abstract

Polycomb repressive complex 1 (PRC1) modifies chromatin through catalysis of histone H2A lysine 119 monoubiquitination (H2AK119ub1). RING1 and RNF2 interchangeably serve as the catalytic subunit within PRC1. Pathogenic missense variants in PRC1 core components reveal functions of these proteins that are obscured in knockout models. While Ring1a knockout models remain healthy, the microcephaly and neuropsychiatric phenotypes associated with a pathogenic RING1 missense variant implicate unappreciated functions. Using an in vitro model of neurodevelopment, we observe that RING1 contributes to the broad placement of H2AK119ub1, and that its targets overlap with those of RNF2. PRC1 complexes harboring hypomorphic RING1 bind target loci but do not catalyze H2AK119ub1, reducing H2AK119ub1 by preventing catalytically active complexes from accessing the locus. This results in delayed DNA damage repair and cell cycle progression in neural progenitor cells (NPCs). Conversely, reduced H2AK119ub1 due to hypomorphic RING1 does not generate differential expression that impacts NPC differentiation. In contrast, hypomorphic RNF2 generates a greater reduction in H2AK119ub1 that results in both delayed DNA repair and widespread transcriptional changes. These findings suggest that the DNA damage response is more sensitive to H2AK119ub1 dosage change than is regulation of gene expression.

Indexed as

DNA RepairHistonesMutation, MissenseNeurogenesisPolycomb Repressive Complex 1UbiquitinationAnimalsChromatinDNA DamageHumansMiceMicrocephalyNeural Stem CellsUbiquitin-Protein LigasesChromatinHistonesPolycomb Repressive Complex 1RNF2 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID39256363
PMCPMC11387726

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.