Evidence map›Paper›PMID 39248805›Full record

ArticleImmunoHorizons2024

Improving Reliability of Immunological Assays by Defining Minimal Criteria for Cell Fitness.

Sabine Ivison, Gabrielle Boucher, Grace Zheng, Rosa V Garcia, Rita Kohen, Alain Bitton, John D Rioux, Megan K Levings, iGenoMed Consortium

Abstract read
In one paragraph

Article in ImmunoHorizons, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sabine IvisonDepartment of Surgery, University of British Columbia, Vancouver, British Columbia, Canada.
Gabrielle BoucherMontreal Heart Institute, Montreal, Quebec, Canada.
Grace ZhengDepartment of Surgery, University of British Columbia, Vancouver, British Columbia, Canada.
Rosa V GarciaDepartment of Surgery, University of British Columbia, Vancouver, British Columbia, Canada.ORCID 0009-0002-7522-6920
Rita KohenMcGill University Health Centre, Montreal, Quebec, Canada.ORCID 0000-0002-0119-3321
Alain BittonMcGill University Health Centre, Montreal, Quebec, Canada.
John D RiouxMontreal Heart Institute, Montreal, Quebec, Canada.ORCID 0000-0001-7560-8326
Megan K LevingsDepartment of Surgery, University of British Columbia, Vancouver, British Columbia, Canada.ORCID 0000-0002-0305-5790
iGenoMed Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human PBMC-based assays are often used as biomarkers for the diagnosis and prognosis of disease, as well as for the prediction and tracking of response to biological therapeutics. However, the development and use of PBMC-based biomarker assays is often limited by poor reproducibility. Complex immunological assays can be further complicated by variation in cell handling before analysis, especially when using cryopreserved cells. Variation in postthaw viability is further increased if PBMC isolation and cryopreservation are done more than a few hours after collection. There is currently a lack of evidence-based standards for the minimal PBMC viability or "fitness" required to ensure the integrity and reproducibility of immune cell-based assays. In this study, we use an "induced fail" approach to examine the effect of thawed human PBMC fitness on four flow cytometry-based assays. We found that cell permeability-based viability stains at the time of thawing did not accurately quantify cell fitness, whereas a combined measurement of metabolic activity and early apoptosis markers did. Investigation of the impact of different types and levels of damage on PBMC-based assays revealed that only when cells were >60-70% live and apoptosis negative did biomarker values cease to be determined by cell fitness rather than the inherent biology of the cells. These data show that, to reproducibly measure immunological biomarkers using cryopreserved PBMCs, minimal acceptable standards for cell fitness should be incorporated into the assay protocol.

Indexed as

Cell SurvivalCryopreservationFlow CytometryLeukocytes, MononuclearApoptosisBiomarkersHumansReproducibility of ResultsBiomarkers

Identifiers

PMID39248805
PMCPMC11447670

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.