Evidence map›Paper›PMID 39248710›Full record

SynthesisAging2024

Decisive gene strategy on osteoarthritis: a comprehensive whole-literature based approach for conclusive gene targets.

Yi-Chou Chen, Yu-Chiao Wang, Meng-Chang Lee, Yu-Hsuan Chen, Wen Su, Pi-Shao Ko, Cheng-Jung Chen, Sui-Lung Su

Abstract readMeta-Analysis
In one paragraph

Synthesis in Aging, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yi-Chou ChenGraduate Institute of Medical Sciences, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Yu-Chiao WangSchool of Public Health, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Meng-Chang LeeSchool of Public Health, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Yu-Hsuan ChenSchool of Public Health, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Wen SuGraduate Institute of Aerospace and Undersea Medicine, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Pi-Shao KoGraduate Institute of Life Sciences, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.
Cheng-Jung ChenDivision of General Surgery, Department of Surgery, Tri-Service General Hospital, National Defense Medical Center, Taipei 114202, Taiwan.
Sui-Lung SuGraduate Institute of Medical Sciences, National Defense Medical Center, Taipei 114201, Taiwan, R.O.C.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrevious meta-analyses only examined the association between single or several gene polymorphisms and osteoarthritis (OA), whereas no studies have concluded that there are existing all gene loci that associate with OA.

objectiveTo assess whether a definite conclusion of the association between the gene loci and OA can be drawn.

methodsDecisive gene strategy (DGS), a literature-based approach, was used to search PubMed, Embase, and Cochrane databases for all meta-analyses that associated gene polymorphisms and OA. Trial Sequential Analysis (TSA) examined the sufficiency of the cumulative sample size. Finally, we assessed the importance of gene loci in OA based on whether there were enough sample sizes and the heterogeneity of the literatures with I

resultsAfter excluding 179 irrelevant publications, 80 meta-analysis papers were recruited. Among Caucasians, SMAD3 rs12901499 (OR = 1.20, 95% CI: 1.12-1.29) was a risk factor with validation of sufficient sample sizes through TSA model. Among Asians, there were 3 gene loci risk factors with validation of sufficient sample sizes through TSA model: ESR1 rs2228480, SMAD3 rs12901499, and MMP-1 rs1799750 (OR = 1.35, 95% CI: 1.08-1.69; OR = 1.34, 95% CI: 1.07-1.69; OR = 1.43, 95% CI: 1.18-1.74, respectively). Besides, 3 gene loci, DVWA rs7639618, GDF5 rs143383, and VDR rs7975232 (OR = 0.78, 95% CI: 0.67-0.90; OR = 0.74, 95% CI: 0.67-0.81; OR = 0.56, 95% CI: 0.35-0.90, respectively) were identified as protective factors through TSA model.

conclusionsWe used DGS to identify conclusive gene loci associated with OA. These findings provide implications of precision medicine in OA and may potentially advance genetic therapy.

Indexed as

Genetic Predisposition to DiseaseOsteoarthritisPolymorphism, Single NucleotideAsian PeopleEstrogen Receptor alphaGrowth Differentiation Factor 5HumansMatrix Metalloproteinase 1Receptors, CalcitriolRisk FactorsSmad3 ProteinWhite PeopleESR1 protein, humanEstrogen Receptor alphaGDF5 protein, humanGrowth Differentiation Factor 5Matrix Metalloproteinase 1MMP1 protein, humanReceptors, CalcitriolSmad3 ProteinSMAD3 protein, humanVDR protein, humandecisive gene strategy (DGS)osteoarthritis (OA)trial sequential analysis (TSA)

Identifiers

PMID39248710
PMCPMC11424587

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.