Evidence map›Paper›PMID 39242995›Full record

ArticleBMC plant biology2024

Genome-wide transcriptome and gene family analysis reveal candidate genes associated with potassium uptake of maize colonized by arbuscular mycorrhizal fungi.

Yunjian Xu, Yixiu Yan, Tianyi Zhou, Jianhui Chun, Yuanchao Tu, Xinyu Yang, Jie Qin, Luyan Ou, Liang Ye, Fang Liu

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Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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5citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Effects ofJournal of fungi (Basel, Switzerland) · 2026
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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Yunjian XuMinistry of Education Key Laboratory for Transboundary Ecosecurity of Southwest China, Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology and Centre for Invasion Biology, Institute of Biodiversity, School of Ecology and Environmental Science, Yunnan University, Kunming, 650504, Yunnan, China.
Yixiu YanSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Tianyi ZhouSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Jianhui ChunSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Yuanchao TuSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Xinyu YangSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Jie QinSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Luyan OuSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Liang YeSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China.
Fang LiuSchool of Agriculture, Yunnan University, Kunming , Yunnan, 650504, China. liufang0019@ynu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPotassium (K) is an essential nutrient for plant growth and development. Maize (Zea mays) is a widely planted crops in the world and requires a huge amount of K fertilizer. Arbuscular mycorrhizal fungi (AMF) are closely related to the K uptake of maize. Genetic improvement of maize K utilization efficiency will require elucidating the molecular mechanisms of maize K uptake through the mycorrhizal pathway. Here, we employed transcriptome and gene family analysis to elucidate the mechanism influencing the K uptake and utilization efficiency of mycorrhizal maize. METHODS AND

resultsThe transcriptomes of maize were studied with and without AMF inoculation and under different K conditions. AM symbiosis increased the K concentration and dry weight of maize plants. RNA sequencing revealed that genes associated with the activity of the apoplast and nutrient reservoir were significantly enriched in mycorrhizal roots under low-K conditions but not under high-K conditions. Weighted gene correlation network analysis revealed that three modules were strongly correlated with K content. Twenty-one hub genes enriched in pathways associated with glycerophospholipid metabolism, glycerolipid metabolism, starch and sucrose metabolism, and anthocyanin biosynthesis were further identified. In general, these hub genes were upregulated in AMF-colonized roots under low-K conditions. Additionally, the members of 14 gene families associated with K obtain were identified (ARF: 38, ILK: 4, RBOH: 12, RUPO: 20, MAPKK: 89, CBL: 14, CIPK: 44, CPK: 40, PIN: 10, MYB: 174, NPF: 79, KT: 19, HAK/HKT/KUP: 38, and CPA: 8) from maize. The transcript levels of these genes showed that 92 genes (ARF:6, CBL:5, CIPK:13, CPK:2, HAK/HKT/KUP:7, PIN:2, MYB:26, NPF:16, RBOH:1, MAPKK:12 and RUPO:2) were upregulated with AM symbiosis under low-K conditions.

conclusionsThis study indicated that AMF increase the resistance of maize to low-K stress by regulating K uptake at the gene transcription level. Our findings provide a genome-level resource for the functional assignment of genes regulated by K treatment and AM symbiosis in K uptake-related gene families in maize. This may contribute to elucidate the molecular mechanisms of maize response to low K stress with AMF inoculation, and provided a theoretical basis for AMF application in the crop field.

Indexed as

MycorrhizaePotassiumSymbiosisTranscriptomeZea maysGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMultigene FamilyPlant RootsPotassiumGene familyMycorrhizaePotassium deficiencyRNA-seq

Identifiers

PMID39242995
PMCPMC11378567

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