Evidence map›Paper›PMID 39242713›Full record

Reviewnpj biodiversity2023

A quixotic view of spatial bias in modelling the distribution of species and their diversity.

Duccio Rocchini, Enrico Tordoni, Elisa Marchetto, Matteo Marcantonio, A Márcia Barbosa, Manuele Bazzichetto, Carl Beierkuhnlein, Elisa Castelnuovo, Roberto Cazzolla Gatti, Alessandro Chiarucci and 22 more

Abstract readReview
In one paragraph

Review in npj biodiversity, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

Duccio RocchiniBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy. duccio.rocchini@unibo.it.
Enrico TordoniDepartment of Botany, Institute of Ecology and Earth Science, University of Tartu, J. Liivi 2, 50409, Tartu, Estonia.
Elisa MarchettoBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Matteo MarcantonioEvolutionary Ecology and Genetics Group, Earth and Life Institute, UCLouvain, 1348, Louvain-la-Neuve, Belgium.
A Márcia BarbosaCICGE (Centro de Investigação em Ciências Geo-Espaciais), Universidade do Porto, Porto, Portugal.
Manuele BazzichettoCzech University of Life Sciences Prague, Faculty of Environmental Sciences, Department of Spatial Sciences, Kamýcka 129, Praha - Suchdol, 16500, Czech Republic.
Carl BeierkuhnleinBiogeography, BayCEER, University of Bayreuth, Universitaetsstraße 30, 95440, Bayreuth, Germany.
Elisa CastelnuovoBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Roberto Cazzolla GattiBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Alessandro ChiarucciBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Ludovico ChieffalloBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Daniele Da ReGeorges Lemaître Center for Earth and Climate Research, Earth and Life Institute, UCLouvain, Louvain-la-Neuve, Belgium.
Michele Di MuscianoBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Giles M FoodySchool of Geography, University of Nottingham, Nottingham, UK.
Lukas GaborDept of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA.
Carol X Garzon-LopezKnowledge Infrastructures, Campus Fryslan University of Groningen, Leeuwarden, The Netherlands.
Antoine GuisanDepartment of Ecology and Evolution, University of Lausanne, 1015, Lausanne, Switzerland.
Tarek HattabMARBEC, Univ Montpellier, CNRS, Ifremer, IRD, Sète, France.
Joaquin HortalDepartment of Biogeography and Global Change, Museo Nacional de Ciencias Naturales (MNCN-CSIC), Madrid, Spain.
William E KuninUniversity of Leeds, Leeds, UK.
Ferenc JordánUniversity of Parma, Parma, Italy.
Jonathan LenoirUMR CNRS 7058 "Ecologie et Dynamique des Systèmes Anthropisés" (EDYSAN), Université de Picardie Jules Verne, 1 Rue des Louvels, 80000, Amiens, France.
Silvia MirriDepartment of Computer Science and Engineering, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Vítězslav MoudrýCzech University of Life Sciences Prague, Faculty of Environmental Sciences, Department of Spatial Sciences, Kamýcka 129, Praha - Suchdol, 16500, Czech Republic.
Babak NaimiRui Nabeiro Biodiversity Chair, MED Institute, University of Évora, Évora, Portugal.
Jakub NowosadInstitute of Geoecology and Geoinformation, Adam Mickiewicz University, Krygowskiego 10, 61-680, Poznan, Poland.
Francesco Maria SabatiniBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Andreas H SchweigerDepartment of Plant Ecology, Institute of Landscape and Plant Ecology, University of Hohenheim, Stuttgart, Germany.
Petra ŠímováCzech University of Life Sciences Prague, Faculty of Environmental Sciences, Department of Spatial Sciences, Kamýcka 129, Praha - Suchdol, 16500, Czech Republic.
Geiziane TessaroloFederal University of Goiás, Campus Central, Anápolis, Brazil.
Piero ZanniniBIOME Lab, Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum University of Bologna, via Irnerio 42, 40126, Bologna, Italy.
Marco MalavasiUniversity of Sassari, Department of Chemistry, Physics, Mathematics and Natural Sciences, Sassari, Italy.

Funding

European Commission 862480Ministero dell'Università e della Ricerca J33C22001190001
6 · The paper itself

Abstract

Ecological processes are often spatially and temporally structured, potentially leading to autocorrelation either in environmental variables or species distribution data. Because of that, spatially-biased in-situ samples or predictors might affect the outcomes of ecological models used to infer the geographic distribution of species and diversity. There is a vast heterogeneity of methods and approaches to assess and measure spatial bias; this paper aims at addressing the spatial component of data-driven biases in species distribution modelling, and to propose potential solutions to explicitly test and account for them. Our major goal is not to propose methods to remove spatial bias from the modelling procedure, which would be impossible without proper knowledge of all the processes generating it, but rather to propose alternatives to explore and handle it. In particular, we propose and describe three main strategies that may provide a fair account of spatial bias, namely: (i) how to represent spatial bias; (ii) how to simulate null models based on virtual species for testing biogeographical and species distribution hypotheses; and (iii) how to make use of spatial bias - in particular related to sampling effort - as a leverage instead of a hindrance in species distribution modelling. We link these strategies with good practice in accounting for spatial bias in species distribution modelling.

Identifiers

PMID39242713
PMCPMC11332097

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.