Evidence map›Paper›PMID 39242068›Full record

ArticleExperimental neurology2024

A deep learning-based approach for unbiased kinematic analysis in CNS injury.

Maureen C Ascona, Ethan Kim Tieu, Erick Gonzalez-Vega, Daniel J Liebl, Roberta Brambilla

Abstract read
In one paragraph

Article in Experimental neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Maureen C AsconaThe Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA.
Ethan Kim TieuThe Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA.
Erick Gonzalez-VegaThe Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA.
Daniel J LieblThe Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA. Electronic address: dliebl@med.miami.edu.
Roberta BrambillaThe Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA; BRIDGE-Brain Research Inter Disciplinary Guided Excellence, Department of Clinical Research, University of Southern Denmark, 5230 Odense M, Denmark. Electronic address: rbrambilla@med.miami.edu.

Funding

Stabilizing the Tripartite Synaptic Complex Following TBIR01NS098740 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Joacir Graciolli Graciolli Cordeiro, Daniel Jon Liebl · 2017 to 2026
$4.7M
Molecular mechanisms of the protective function of oligodendroglial TNFR2: a new therapeutic target in neuro-immune diseaseR01NS094522 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BRAMBILLA, ROBERTA · 2015 to 2019
$1.7M
Role of astrocytic TNF receptor 2 in synaptic stability and cognitive function after traumatic brain injuryR21NS120028 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BRAMBILLA, ROBERTA, LIEBL, DANIEL JON · 2020 to 2020
$422k
NINDS NIH HHS R01 NS094522NINDS NIH HHS R01 NS098740NINDS NIH HHS R21 NS120028
6 · The paper itself

Abstract

Traumatic spinal cord injury (SCI) is a devastating condition that impacts over 300,000 individuals in the US alone. Depending on the severity of the injury, SCI can lead to varying degrees of sensorimotor deficits and paralysis. Despite advances in our understanding of the underlying pathological mechanisms of SCI and the identification of promising molecular targets for repair and functional restoration, few therapies have made it into clinical use. To improve the success rate of clinical translation, more robust, sensitive, and reproducible means of functional assessment are required. The gold standards for the evaluation of locomotion in rodents with SCI are the Basso Beattie Bresnahan (BBB) scale and Basso Mouse Scale (BMS). To overcome the shortcomings of current methods, we developed two separate markerless kinematic analysis paradigms in mice, MotorBox and MotoRater, based on deep-learning algorithms generated with the DeepLabCut open-source toolbox. The MotorBox system uses an originally designed, custom-made chamber, and the MotoRater system was implemented on a commercially available MotoRater device. We validated the MotorBox and MotoRater systems by comparing them with the traditional BMS test and extracted metrics of movement and gait that can provide an accurate and sensitive representation of mouse locomotor function post-injury, while eliminating investigator bias and variability. The integration of MotorBox and/or MotoRater assessments with BMS scoring will provide a much wider range of information on specific aspects of locomotion, ensuring the accuracy, rigor, and reproducibility of behavioral outcomes after SCI.

Indexed as

Deep LearningMice, Inbred C57BLSpinal Cord InjuriesAnimalsBiomechanical PhenomenaFemaleLocomotionMiceDeepLabCutKinematicsMachine learningSpinal cord injuryTraumatic brain injury

Identifiers

PMID39242068
PMCPMC12576851

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.