Evidence map›Paper›PMID 39241781›Full record

ArticleCancer cell2024

Integrated electrophysiological and genomic profiles of single cells reveal spiking tumor cells in human glioma.

Rachel N Curry, Qianqian Ma, Malcolm F McDonald, Yeunjung Ko, Snigdha Srivastava, Pey-Shyuan Chin, Peihao He, Brittney Lozzi, Prazwal Athukuri, Junzhan Jing and 7 more

Abstract read
In one paragraph

Article in Cancer cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Hp1bp3 loss links chromatin reorganization to metabolic vulnerability in glioma.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. The double-positive cells in the tumor microenvironment.Journal of translational internal medicine · 2026
    Article
  13. Review
  14. Article
  15. Critical role of cell competition in gliomagenesis.bioRxiv : the preprint server for biology · 2026
    Article
  16. Review
  17. Review
  18. CulturedBrain communications · 2026
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Rachel N CurryThe Integrative Molecular and Biomedical Sciences Graduate Program, Baylor College of Medicine, Houston, TX, USA; Center for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX, USA.
Qianqian MaJan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, TX, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Malcolm F McDonaldCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX, USA; Medical Scientist Training Program, Baylor College of Medicine, Houston, TX, USA; Program in Development, Disease Models, and Therapeutics, Baylor College of Medicine, Houston, TX, USA.
Yeunjung KoCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX, USA; Center for Cancer Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA.
Snigdha SrivastavaJan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, TX, USA; Medical Scientist Training Program, Baylor College of Medicine, Houston, TX, USA; Department of Human and Molecular Genetics, Baylor College of Medicine, Houston, TX, USA.
Pey-Shyuan ChinDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Peihao HeCenter for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX, USA; Center for Cancer Neuroscience, Baylor College of Medicine, Houston, TX, USA; Program in Cancer Cell Biology, Baylor College of Medicine, Houston, TX, USA.
Brittney LozziProgram in Genetics and Genomics, Baylor College of Medicine, Houston, TX, USA.
Prazwal AthukuriDepartment of Neurosurgery, Baylor College of Medicine, Houston, TX, USA.
Junzhan JingJan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, TX, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Su WangDepartment of Neurosurgery, Baylor College of Medicine, Houston, TX, USA.
Arif O HarmanciMcWilliams School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, USA.
Benjamin ArenkielDepartment of Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Human and Molecular Genetics, Baylor College of Medicine, Houston, TX, USA.
Xiaolong JiangJan and Dan Duncan Neurological Research Institute at Texas Children's Hospital, Houston, TX, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Ophthalmology, Baylor College of Medicine, Houston, TX, USA. Electronic address: xiaolonj@bcm.edu.
Benjamin DeneenThe Integrative Molecular and Biomedical Sciences Graduate Program, Baylor College of Medicine, Houston, TX, USA; Center for Cell and Gene Therapy, Baylor College of Medicine, Houston, TX, USA; Program in Development, Disease Models, and Therapeutics, Baylor College of Medicine, Houston, TX, USA; Center for Cancer Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA; Program in Cancer Cell Biology, Baylor College of Medicine, Houston, TX, USA. Electronic address: deneen@bcm.edu.
Ganesh RaoCenter for Cancer Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA. Electronic address: grao@bcm.edu.
Akdes Serin HarmanciCenter for Cancer Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Neurosurgery, Baylor College of Medicine, Houston, TX, USA. Electronic address: akdes.serinharmanci@bcm.edu.

Funding

VISION RESEARCH CENTERP30EY002520 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$14.8M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Modulation of Microglia and T Cell Interactions in Malignant GliomaR01CA120813 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HEIMBERGER, AMY BETH, RAO, GANESH · 2007 to 2025
$4.7M
Systematic Characterization and Targeting of Neomorphic Drivers in CancerU01CA281902 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Benjamin Deneen, Han Liang · 2023 to 2026
$3.5M
MOLECULAR DISSECTION OF SEIZURE MICROENVIRONMENT IN MALIGNANT GLIOMAR01CA223388 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DENEEN, BENJAMIN, NOEBELS, JEFFREY · 2018 to 2022
$3.5M
Astrocyte Transcriptional Dependencies in Brain CircuitsR35NS132230 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI Benjamin Deneen · 2023 to 2026
$3.5M
Development of aberrant cortical interneuron circuitry in genetic mouse models of absence epilepsyR01NS110767 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI JIANG, XIAOLONG, NOEBELS, JEFFREY · 2020 to 2024
$2.2M
Deciphering the building blocks of the macaque prefrontal cortical microcircuitR01MH120404 · NIMH · BAYLOR COLLEGE OF MEDICINE · PI JIANG, XIAOLONG · 2019 to 2023
$2.0M
Multi-Cellular Analysis of the Retinal NetworkR01EY033492 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Xiaolong Jiang, Samuel M Wu · 2022 to 2026
$2.0M
MODELING MALIGNANT PROGRESSION IN GLIOMAR01NS094615 · NINDS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAO, GANESH · 2016 to 2020
$1.8M
Cellular and Molecular Mechanisms of GBM InfiltrationR01NS124093 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI Benjamin Deneen, Ganesh Rao · 2022 to 2026
$1.6M
Deciphering the transcriptomic signatures, physiology, and connectivity of the specialized morphotypes in macaque insular cortexR01MH122169 · NIMH · BAYLOR COLLEGE OF MEDICINE · PI JIANG, XIAOLONG · 2020 to 2024
$1.2M
NCI NIH HHS F31 CA265156NCI NIH HHS F99 CA274700NCI NIH HHS K00 CA274700NCI NIH HHS R01 CA223388NCI NIH HHS U01 CA281902NEI NIH HHS P30 EY002520NEI NIH HHS R01 EY033492NHLBI NIH HHS T32 HL092332NIH HHS S10 OD023469NIH HHS S10 OD025240NIMH NIH HHS R01 MH120404NIMH NIH HHS R01 MH122169NINDS NIH HHS R01 NS094615NINDS NIH HHS R01 NS110767NINDS NIH HHS R01 NS124093NINDS NIH HHS R35 NS132230
6 · The paper itself

Abstract

Prior studies have described the complex interplay that exists between glioma cells and neurons; however, the electrophysiological properties endogenous to glioma cells remain obscure. To address this, we employed Patch-sequencing (Patch-seq) on human glioma specimens and found that one-third of patched cells in IDH mutant (IDH

Indexed as

Action PotentialsBrain NeoplasmsGliomaSingle-Cell AnalysisElectrophysiological PhenomenaGABAergic NeuronsGenomicsHumansIsocitrate DehydrogenaseMutationTranscriptomeIsocitrate Dehydrogenaseaction potentialsGABAergic neuronsgliomamachine learningoligodendrocyte precursor cellsPatch-seqscRNA-seq

Identifiers

PMID39241781
PMCPMC11479845

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.