Evidence map›Paper›PMID 39240941›Full record

ArticlePloS one2024

Expression patterns of candidate genes for the Lr46/Yr29 "slow rust" locus in common wheat (Triticum aestivum L.) and associated miRNAs inform of the gene conferring the Puccinia triticina resistance trait.

Julia Spychała, Agnieszka Tomkowiak, Aleksandra Noweiska, Roksana Bobrowska, Sandra Rychel-Bielska, Jan Bocianowski, Łukasz Wolko, Przemysław Łukasz Kowalczewski, Marcin Nowicki, Michał Tomasz Kwiatek

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Genetic Background-Dependent Expression ofInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Julia SpychałaDepartment of Genetics and Plant Breeding, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0003-1734-3803
Agnieszka TomkowiakDepartment of Genetics and Plant Breeding, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0001-9516-8911
Aleksandra NoweiskaDepartment of Genetics and Plant Breeding, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0002-0673-9784
Roksana BobrowskaDepartment of Genetics and Plant Breeding, Poznań University of Life Sciences, Poznań, Poland.
Sandra Rychel-BielskaDepartment of Genetics, Plant Breeding and Seed Production, Wrocław University of Environmental and Life Sciences, Wrocław, Poland.ORCID 0000-0002-2429-8054
Jan BocianowskiDepartment of Mathematical and Statistical Methods, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0002-0102-0084
Łukasz WolkoDepartment of Biochemistry and Biotechnology, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0002-3626-4388
Przemysław Łukasz KowalczewskiDepartment of Food Technology of Plant Origin, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0002-0153-4624
Marcin NowickiDepartment of Entomology and Plant Pathology, Institute of Agriculture, University of Tennessee, Knoxville, Tennessee, United States of America.ORCID 0000-0002-2655-5464
Michał Tomasz KwiatekDepartment of Genetics and Plant Breeding, Poznań University of Life Sciences, Poznań, Poland.ORCID 0000-0001-9442-3124

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf rust caused by Puccinia triticina (Pt) is one of the most impactful diseases causing substantial losses in common wheat (Triticum aestivum L.) crops. In adult plants resistant to Pt, a horizontal adult plant resistance (APR) is observed: APR protects the plant against multiple pathogen races and is distinguished by durable persistence under production conditions. The Lr46/Yr29 locus was mapped to chromosome 1B of common wheat genome, but the identity of the underlying gene has not been demonstrated although several candidate genes have been proposed. This study aimed to analyze the expression of nine candidate genes located at the Lr46/Yr29 locus and their four complementary miRNAs (tae-miR5384-3p, tae-miR9780, tae-miR9775, and tae-miR164), in response to Pt infection. The plant materials tested included five reference cultivars in which the molecular marker csLV46G22 associated with the Lr46/Yr29-based Pt resistance was identified, as well as one susceptible control cultivar. Biotic stress was induced in adult plants by inoculation with fungal spores under controlled conditions. Plant material was sampled before and at 6, 12, 24, 48 hours post inoculation (hpi). Differences in expression of candidate genes at the Lr46/Yr29 locus were analyzed by qRT-PCR and showed that the expression of the genes varied at the analyzed time points. The highest expression of Lr46/Yr29 candidate genes (Lr46-Glu1, Lr46-Glu2, Lr46-Glu3, Lr46-RLK1, Lr46-RLK2, Lr46-RLK3, Lr46-RLK4, Lr46-Snex, and Lr46-WRKY) occurred at 12 and 24 hpi and such expression profiles were obtained only for one candidate gene among the nine genes analyzed (Lr46-Glu2), indicating that it may be a contributing factor in the resistance response to Pt infection.

Indexed as

Disease ResistanceGene Expression Regulation, PlantMicroRNAsPlant DiseasesPucciniaTriticumBasidiomycotaGenes, PlantMicroRNAs

Identifiers

PMID39240941
PMCPMC11379320

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.