Evidence map›Paper›PMID 39240839›Full record

ArticlePloS one2024

Genetic drift, historic migration, and limited gene flow contributing to the subpopulation divergence in wild sea beet (Beta vulgaris ssp. maritima (L.) Arcang).

Muhammad Massub Tehseen, Nathan A Wyatt, Melvin D Bolton, Karen K Fugate, Lisa S Preister, Shengming Yang, Vanitharani Ramachandran, Xuehui Li, Chenggen Chu

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Muhammad Massub TehseenDepartment of Plant Sciences, North Dakota State University, Fargo, ND, United States of America.
Nathan A WyattUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.
Melvin D BoltonUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.ORCID 0000-0003-1197-2078
Karen K FugateUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.
Lisa S PreisterUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.
Shengming YangUSDA-ARS, Edward T. Schafer Agricultural Research Center, Cereal Research Unit, Fargo, ND, United States of America.ORCID 0000-0002-4558-8448
Vanitharani RamachandranUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.
Xuehui LiDepartment of Plant Sciences, North Dakota State University, Fargo, ND, United States of America.
Chenggen ChuUSDA-ARS, Edward T. Schafer Agricultural Research Center, Sugarbeet and Potato Research Unit, Fargo, ND, United States of America.ORCID 0000-0001-6189-5985

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cultivated beet (Beta vulgaris L. ssp. vulgaris) originated from sea beet (B. vulgaris ssp. maritima (L.) Arcang), a wild beet species widely distributed along the coasts of the Mediterranean Sea and Atlantic Ocean, as well as northern Africa. Understanding the evolution of sea beet will facilitate its efficient use in sugarbeet improvement. We used SNPs (single nucleotide polymorphisms) covering the whole genome to analyze 599 sea beet accessions collected from the north Atlantic Ocean and Mediterranean Sea coasts. All B. maritima accessions can be grouped into eight clusters with each corresponding to a specific geographic region. Clusters 2, 3 and 4 with accessions mainly collected from Mediterranean coasts are genetically close to each other as well as to Cluster 6 that contained mainly cultivated beet. Other clusters were relatively distinct from cultivated beets with Clusters 1 and 5 containing accessions from north Atlantic Ocean coasts, Clusters 7 and Cluster 8 mainly have accessions from northern Egypt and southern Europe, and northwest Morocco, respectively. Distribution of B. maritima subpopulations aligns well with the direction of marine currents that was considered a main dynamic force in spreading B. maritima during evolution. Estimation of genetic diversity indices supported the formation of B. maritima subpopulations due to local genetic drift, historic migration, and limited gene flow. Our results indicated that B. maritima originated from southern Europe and then spread to other regions through marine currents to form subpopulations. This research provides vital information for conserving, collecting, and utilizing wild sea beet to sustain sugarbeet improvement.

Indexed as

Beta vulgarisGene FlowGenetic DriftPolymorphism, Single NucleotideAtlantic OceanGenetic VariationMediterranean Sea

Identifiers

PMID39240839
PMCPMC11379190

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.