Evidence map›Paper›PMID 39240523›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Retinal Explant Culture from Mouse, Human, and Nonhuman Primates and Its Applications in Vision Research.

Abhishek Vats, Zhouhuan Xi, Leah C Byrne, Yuanyuan Chen

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Abhishek VatsDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.
Zhouhuan XiDepartment of Ophthalmology, Eye Center, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, China.
Leah C ByrneDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA.
Yuanyuan ChenDepartment of Ophthalmology, University of Pittsburgh, Pittsburgh, PA, USA. cheny1@pitt.edu.

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Ethan A Rossi · 1989 to 2026
$17.8M
A Massive Library of AAVs to Target Transcriptionally-Defined Primate Cell TypesUG3MH120094 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STAUFFER, WILLIAM RICHARD · 2019 to 2021
$5.8M
A Massive Library of AAVs to Target Transcriptionally-Defined Primate Cell TypesUH3MH120094 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STAUFFER, WILLIAM RICHARD · 2023 to 2024
$3.1M
Pharmacological studies of rhodopsin metabolismR01EY030991 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Yuanyuan Chen · 2020 to 2026
$2.3M
NEI NIH HHS P30 EY008098NEI NIH HHS R01 EY030991NIMH NIH HHS UG3 MH120094NIMH NIH HHS UH3 MH120094
6 · The paper itself

Abstract

The retinal explant culture system is a valuable tool for studying the pharmacological, toxicological, and developmental aspects of the retina. It is also used for translational studies such as gene therapy. While no photoreceptor-like cell lines are available for in vitro studies of photoreceptor cell biology, the retinal explant culture maintains the laminated retinal structure ex vivo for as long as a month. Human and nonhuman primate (NHP) postmortem retinal explants cut into small pieces offer the possibility of testing multiple conditions for safety and adeno-associated viral (AAV) vector optimization. In addition, the cone-enriched foveal area can be studied using the retinal explants. Here, we present a detailed working protocol for retinal explant isolation and culture from mouse, human, and NHP for testing drug efficacy and AAV transduction. Future applications of this protocol include combining live imaging and multiwell retinal explant culture for high-throughput drug screening systems in rodent and human retinal explants to identify new drugs against retinal degeneration.

Indexed as

DependovirusRetinaAnimalsGenetic VectorsHumansMicePrimatesTissue Culture TechniquesTransduction, GeneticAAV transduction in retinal explantExplant cultureEx vivo cultureOrganotypic retinal culture

Identifiers

PMID39240523
PMCPMC12225654

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.