Evidence map›Paper›PMID 39240094›Full record

ArticleThe journal of physical chemistry. B2024

Membrane Stabilization of Helical Previtamin D Conformers as Possible Enhancement of Vitamin D Photoproduction.

Adam C Smith, Matthew Plazola, Phillip S Hudson, Enrico Tapavicza

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Adam C SmithDepartment of Chemistry and Biochemistry, California State University Long Beach, 1250 Bellflower Boulevard, Long Beach, California 90840, United States.
Matthew PlazolaDepartment of Chemistry and Biochemistry, California State University Long Beach, 1250 Bellflower Boulevard, Long Beach, California 90840, United States.
Phillip S HudsonLaboratory of Computational Biology, National Institutes of Health, National Heart, Lung and Blood Institute, 12 South Drive, Rm 3053, Bethesda, Maryland 20892-5690, United States.
Enrico TapaviczaDepartment of Chemistry and Biochemistry, California State University Long Beach, 1250 Bellflower Boulevard, Long Beach, California 90840, United States.ORCID 0000-0002-0640-0297

Funding

CSULB Building Biomedical Research Program: Student Training CoreTL4GM118980 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI CHUN, CHI-AH, DILLON, JESSE · 2015 to 2023
$12.3M
CSULB Building Biomedical Research Program: Research Enrichment CoreRL5GM118978 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI CHUN, CHI-AH, DILLON, JESSE · 2015 to 2023
$7.3M
Design and application ofrobust and efficient QM/MM free energy simulation methods for biomolecular systemsR01GM129519 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI WOODCOCK III, HENRY LEE · 2018 to 2025
$1.9M
In Silico Study and Optimization of Molecular Nanomotors for Membrane PhotopharmacologyR16GM149410 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI Enrico Tapavicza · 2023 to 2026
$590k
Ab initio modelling of vitamin D photochemistry in biological membranesR15GM126524 · NIGMS · CALIFORNIA STATE UNIVERSITY LONG BEACH · PI TAPAVICZA, ENRICO · 2017 to 2017
$443k
NIGMS NIH HHS R01 GM129519NIGMS NIH HHS R15 GM126524NIGMS NIH HHS R16 GM149410NIGMS NIH HHS RL5 GM118978NIGMS NIH HHS TL4 GM118980
6 · The paper itself

Abstract

Photoinduced vitamin D formation occurs 10-15-fold faster in phospholipid bilayers (PLB) than in isotropic solution. It has been hypothesized that amphipatic interactions of the PLB with the rotationally flexible previtamin D (Pre) stabilize its helical conformers, enhancing thermal intramolecular [1,7]-hydrogen transfer, forming vitamin D. To test this hypothesis, we carried out molecular dynamics (MD) simulations of Pre in a PLB composed of dipalmitoylphosphatidylcholine (DPPC). We designed a classical force field capable of accurately describing the equilibrium composition of Pre conformers. Using adaptive biasing force MD simulations, we determined the free energy of Pre conformers in isotropic environments (hexane and gas-phase) and in the anisotropic environment of a DPPC PLB. We find a total increase of 25.5% of the population of both helical conformers (+20.5%

Indexed as

1,2-DipalmitoylphosphatidylcholineLipid BilayersMolecular Dynamics SimulationMolecular ConformationPhotochemical ProcessesThermodynamicsVitamin D1,2-DipalmitoylphosphatidylcholineLipid BilayersVitamin D

Identifiers

PMID39240094
PMCPMC11421079

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.