Evidence map›Paper›PMID 39240007›Full record

ArticleAdvanced materials (Deerfield Beach, Fla.)2024

Stepwise Stiffening/Softening of and Cell Recovery from Reversibly Formulated Hydrogel Interpenetrating Networks.

Irina Kopyeva, Ethan C Goldner, Jack W Hoye, Shiyu Yang, Mary C Regier, John C Bradford, Kaitlyn R Vera, Ross C Bretherton, Jennifer L Robinson, Cole A DeForest

Abstract read
In one paragraph

Article in Advanced materials (Deerfield Beach, Fla.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Stimuli-triggered formation ofCell biomaterials · 2026
    Article
  8. Article
  9. Enzymatic Methods for Assembling and Modifying Hydrogel Biomaterials.Regenerative engineering and translational medicine · 2025
    Article
  10. 3D Printing of Enzymatically Softening Hydrogel Biomaterials.Regenerative engineering and translational medicine · 2025
    Article
  11. Review
  12. Review
  13. Suspended Tissue Open Microfluidic Patterning (STOMP).Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Suspended Tissue Open Microfluidic Patterning (STOMP).bioRxiv : the preprint server for biology · 2025
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Irina KopyevaDepartment of Bioengineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0003-3740-6971
Ethan C GoldnerDepartment of Chemical Engineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0009-0000-6347-2353
Jack W HoyeDepartment of Chemical Engineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0009-0003-8251-731X
Shiyu YangDepartment of Chemical Engineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0009-0004-9126-7786
Mary C RegierInstitute of Stem Cell & Regenerative Medicine, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0001-9074-6604
John C BradfordDepartment of Bioengineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0002-3965-5106
Kaitlyn R VeraDepartment of Chemical Engineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0009-0001-7898-7533
Ross C BrethertonDepartment of Bioengineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0002-9567-8556
Jennifer L RobinsonInstitute of Stem Cell & Regenerative Medicine, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0002-5421-2370
Cole A DeForestDepartment of Bioengineering, University of Washington, Seattle, WA, 98105, USA.ORCID 0000-0003-0337-3577

Funding

Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Mimicking, Exploiting, and Understanding Biology's Heterogeneity in 4DR35GM138036 · NIGMS · UNIVERSITY OF WASHINGTON · PI Cole A DeForest · 2020 to 2026
$2.3M
Biomaterial technologies for interrogating sex differences in tissue repair and homeostasisR35GM143081 · NIGMS · UNIVERSITY OF WASHINGTON · PI ROBINSON, JENNIFER LINDSEY · 2021 to 2025
$2.0M
A 4D-tunable hydrogel for the study of the impact of the tumor microenvironment on the development of colorectal cancerR01CA289291 · NCI · UNIVERSITY OF WASHINGTON · PI Nancy L. Allbritton, Cole A DeForest · 2024 to 2026
$1.6M
On-Demand Modulation of Extracellular Matrix Mechanics for Studying RhoA Activation in Primary and Metastatic Colorectal CancerR21CA283686 · NCI · UNIVERSITY OF WASHINGTON · PI DEFOREST, COLE A, GRADY, WILLIAM MALLORY · 2024 to 2024
$428k
Institute for Stem Cell and Regenerative MedicineLouis Stokes Alliance for Minority ParticipationMary Gates Endowment for StudentsNational Science Foundation 1652141National Science Foundation Graduate Research Fellowships 1762114NCI NIH HHS R01 CA289291NCI NIH HHS R21 CA283686NCI NIH HHS T32 CA080416NCI NIH HHS T32CA080416NIGMS NIH HHS R35 GM138036NIGMS NIH HHS R35 GM143081NIH HHS R01CA289291NIH HHS R21CA283686NIH HHS R35GM138036NIH HHS R35GM143081
6 · The paper itself

Abstract

Biomechanical contributions of the extracellular matrix underpin cell growth and proliferation, differentiation, signal transduction, and other fate decisions. As such, biomaterials whose mechanics can be spatiotemporally altered- particularly in a reversible manner- are extremely valuable for studying these mechanobiological phenomena. Herein, a poly(ethylene glycol) (PEG)-based hydrogel model consisting of two interpenetrating step-growth networks is introduced that are independently formed via largely orthogonal bioorthogonal chemistries and sequentially degraded with distinct recombinant sortases, affording reversibly tunable stiffness ranges that span healthy and diseased soft tissues (e.g., 500 Pa-6 kPa) alongside terminal cell recovery for pooled and/or single-cell analysis in a near "biologically invisible" manner. Spatiotemporal control of gelation within the primary supporting network is achieved via mask-based and two-photon lithography; these stiffened patterned regions can be subsequently returned to the original soft state following sortase-based secondary network degradation. Using this approach, the effects of 4D-triggered network mechanical changes on human mesenchymal stem cell morphology and Hippo signaling, as well as Caco-2 colorectal cancer cell mechanomemory using transcriptomics and metabolic assays are investigated. This platform is expected to be of broad utility for studying and directing mechanobiological phenomena, patterned cell fate, and disease resolution in softer matrices.

Indexed as

HydrogelsMesenchymal Stem CellsPolyethylene GlycolsBiocompatible MaterialsCaco-2 CellsExtracellular MatrixHumansBiocompatible MaterialsHydrogelsPolyethylene Glycolsbioorthogonalhydrogelsinterpenetrating polymer networksmechanomemorysortasestimuli‐responsive

Identifiers

PMID39240007
PMCPMC11530321

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.