Evidence map›Paper›PMID 39239265›Full record

ArticleData in brief2024

Phenotyping data coupled with RNA sequencing of apple genotypes exhibiting contrasted quantitative trait loci architecture for apple scab (

Juliette Bénéjam, Julie Ferreira de Carvalho, Elisa Ravon, Christelle Heintz, Matthieu Gaucher, Charles-Eric Durel, Marie-Noëlle Brisset, Laure Perchepied

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Data in brief, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Juliette BénéjamUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Julie Ferreira de CarvalhoUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Elisa RavonUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Christelle HeintzUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Matthieu GaucherUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Charles-Eric DurelUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Marie-Noëlle BrissetUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.
Laure PerchepiedUniversity of Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous studies have highlighted the role of three quantitative trait loci (QTL, i.e. 'qT1', 'qF11' and 'qF17') in partial resistance to apple scab. Underlying molecular mechanisms of these loci are yet unknown. Exploring differential gene expression between apple genotypes carrying contrasting combinations of these QTLs could depict original candidate genes and pathways implicated. We therefore carried out RNA sequencing just before and five days after inoculation of the pathogenic fungi

Indexed as

Biotic interactionsGenetic resistance mechanismsMalus domesticaQTLTranscriptomic

Identifiers

PMID39239265
PMCPMC11374964

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.