Evidence map›Paper›PMID 39237645›Full record

ArticleScientific reports2024

Biological function and potential application of PANoptosis-related genes in colorectal carcinogenesis.

Xuan Yu, Yongfu Shao, Haotian Dong, Xinjun Zhang, Guoliang Ye

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Targeting the non-coding RNA-PANoptosis axis: a novel frontier in disease diagnosis and therapy.Apoptosis : an international journal on programmed cell death · 2026
    Review
  2. Role of PANoptosis in intestinal diseases and its therapeutic implications.Journal of molecular medicine (Berlin, Germany) · 2026
    Review
  3. Review
  4. PANoptosis: potential new targets and therapeutic prospects in digestive diseases.Apoptosis : an international journal on programmed cell death · 2025
    Review
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xuan Yu *Department of Gastroenterology, the First Affiliated Hospital of Ningbo University, Ningbo, 315020, China.
Yongfu Shao *Department of Gastroenterology, the First Affiliated Hospital of Ningbo University, Ningbo, 315020, China.
Haotian DongHealth Science Center, Ningbo University, Ningbo, 315211, China.
Xinjun ZhangDepartment of Gastroenterology, the First Affiliated Hospital of Ningbo University, Ningbo, 315020, China. zhangxinjun@nbu.edu.cn.
Guoliang YeDepartment of Gastroenterology, the First Affiliated Hospital of Ningbo University, Ningbo, 315020, China. ndfyygl@126.com.

Funding

Key Scientific and Technological Projects of Ningbo 2021Z133Key Scientific and Technological Projects of Ningbo 2022Z130Ningbo Top Medical and Health Research Program 2023020612
6 · The paper itself

Abstract

PANoptosis induces programmed cell death (PCD) through extensive crosstalk and is associated with development of cancer. However, the functional mechanisms, clinical significance, and potential applications of PANoptosis-related genes (PRGs) in colorectal cancer (CRC) have not been fully elucidated. Functional enrichment of key PRGs was analyzed based on databases, and relationships between key PRGs and the immune microenvironment, immune cell infiltration, chemotherapy drug sensitivity, tumor progression genes, single-cell cellular subgroups, signal transduction pathways, transcription factor regulation, and miRNA regulatory networks were systematically explored. This study identified 5 key PRGs associated with CRC: BCL10, CDKN2A, DAPK1, PYGM and TIMP1. Then, RT-PCR was used to verify expression of these genes in CRC cells and tissues. Clinical significance and prognostic value of key genes were further verified by multiple datasets. Analyses of the immune microenvironment, immune cell infiltration, chemotherapy drug sensitivity, tumor progression genes, single-cell cellular subgroups, and signal transduction pathways suggest a close relationship between these key genes and development of CRC. In addition, a novel prognostic nomogram model for CRC was successfully constructed by combining important clinical indicators and the key genes. In conclusion, our findings offer new insights for understanding the pathogenesis of CRC, predicting CRC prognosis, and identifying multiple therapeutic targets for future CRC therapy.

Indexed as

Colorectal NeoplasmsGene Expression Regulation, NeoplasticTumor MicroenvironmentBiomarkers, TumorCarcinogenesisCyclin-Dependent Kinase Inhibitor p16Death-Associated Protein KinasesGene Regulatory NetworksHumansMicroRNAsNomogramsPrognosisSignal TransductionTissue Inhibitor of Metalloproteinase-1Biomarkers, TumorCDKN2A protein, humanCyclin-Dependent Kinase Inhibitor p16DAPK1 protein, humanDeath-Associated Protein KinasesMicroRNAsTIMP1 protein, humanTissue Inhibitor of Metalloproteinase-1Chemotherapy drug sensitivityColorectal cancerImmune microenvironmentNomogramPANoptosisPrognosis

Identifiers

PMID39237645
PMCPMC11377449

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.