Evidence map›Paper›PMID 39237598›Full record

ArticleScientific reports2024

A Gaussia luciferase reporter assay for the evaluation of coronavirus Nsp5/3CLpro activity.

Asimenia Vlachou, Rayhane Nchioua, Kerstin Regensburger, Frank Kirchhoff, Dorota Kmiec

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Asimenia VlachouInstitute of Molecular Virology, Ulm University Medical Center, 89081, Ulm, Germany.
Rayhane NchiouaInstitute of Molecular Virology, Ulm University Medical Center, 89081, Ulm, Germany.
Kerstin RegensburgerInstitute of Molecular Virology, Ulm University Medical Center, 89081, Ulm, Germany.
Frank KirchhoffInstitute of Molecular Virology, Ulm University Medical Center, 89081, Ulm, Germany.
Dorota KmiecInstitute of Molecular Virology, Ulm University Medical Center, 89081, Ulm, Germany. dorota.kmiec@uni-ulm.de.

Funding

Deutsche Forschungsgemeinschaft CRC 1279Else Kröner-Fresenius-Stiftung 2022_EKEA.47European Commission 101062524Medizinische Fakultät, Universität Ulm L.SBN.0208
6 · The paper itself

Abstract

Human coronaviruses (hCoVs) infect millions of people every year. Among these, MERS, SARS-CoV-1, and SARS-CoV-2 caused significant morbidity and mortality and their emergence highlights the risk of possible future coronavirus outbreaks. Therefore, broadly-active anti-coronavirus drugs are needed. Pharmacological inhibition of the hCoV protease Nsp5 (3CLpro) is clinically beneficial as shown by the wide and effective use of Paxlovid (nirmatrelvir, ritonavir). However, further treatment options are required due to the risk of drug resistance. To facilitate the assessment of coronavirus protease function and its pharmacological inhibition, we developed an assay allowing rapid and reliable quantification of Nsp5 activity under biosafety level 1 conditions. It is based on an ACE2-Gal4 transcription factor fusion protein separated by a Nsp5 recognition site. Cleavage by Nsp5 releases the Gal4 transcription factor, which then induces the expression of Gaussia luciferase. Our assay is compatible with Nsp5 proteases from all hCoVs and allows simultaneous measurement of inhibitory and cytotoxic effects of the tested compounds. Proof-of-concept measurements confirmed that nirmatrelvir, GC376 and lopinavir inhibit SARS-CoV-2 Nsp5 function. Furthermore, the assay accurately predicted the impact of Nsp5 mutations on catalytic activity and inhibitor sensitivity. Overall, the reporter assay is suitable for evaluating viral protease activity.

Indexed as

Coronavirus 3C ProteasesLuciferasesAntiviral AgentsGenes, ReporterHEK293 CellsHumansSARS-CoV-2Antiviral AgentsCoronavirus 3C ProteasesLuciferases3CLproCoronavirusesGaussia reporter assayNsp5Protease inhibitorSARS-CoV-2

Identifiers

PMID39237598
PMCPMC11377810

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.