Evidence map›Paper›PMID 39237529›Full record

ArticleNature communications2024

RAD52 resolves transcription-replication conflicts to mitigate R-loop induced genome instability.

Manisha Jalan, Aman Sharma, Xin Pei, Nils Weinhold, Erika S Buechelmaier, Yingjie Zhu, Sana Ahmed-Seghir, Abhirami Ratnakumar, Melody Di Bona, Niamh McDermott and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Targeting RAD52 overcomes PARP inhibitor resistance in preclinicalbioRxiv : the preprint server for biology · 2025
    Article
  12. Transcription-Replication Conflicts: Unlocking New Frontiers in Cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  13. Review
  14. Wdr5-mediated H3K4 methylation facilitates HSPC development via maintenance of genomic stability in zebrafish.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Manisha JalanDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA. jalanm@mskcc.org.ORCID 0000-0002-4467-4934
Aman SharmaDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.ORCID 0000-0003-1017-8307
Xin PeiDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.ORCID 0000-0001-9961-6152
Nils WeinholdDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Erika S BuechelmaierDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Yingjie ZhuDepartment of Pathology and Laboratory Medicine, MSKCC, New York, NY, 10065, USA.ORCID 0000-0003-1849-6019
Sana Ahmed-SeghirDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Abhirami RatnakumarDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Melody Di BonaDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.ORCID 0000-0002-8853-2604
Niamh McDermottDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Joan Gomez-AguilarDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Kyrie S AndersonDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Charlotte K Y NgDepartment for BioMedical Research, University of Bern, Bern, CH, 3008, Switzerland.
Pier SelenicaDepartment of Pathology and Laboratory Medicine, MSKCC, New York, NY, 10065, USA.
Samuel F BakhoumDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.
Jorge S Reis-FilhoDepartment of Pathology and Laboratory Medicine, MSKCC, New York, NY, 10065, USA.
Nadeem RiazDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA.ORCID 0000-0001-9873-5862
Simon N PowellDepartment of Radiation Oncology, MSKCC, New York, NY, 10065, USA. powells@mskcc.org.ORCID 0000-0002-8183-4765

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Targeting Polθ to Overcome PARP Inhibitor Resistance in Homologous Recombination Deficient Breast CancerP50CA247749 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Simon N. Powell · 2020 to 2026
$16.3M
American Association for Cancer Research (American Association for Cancer Research, Inc.) 20-40-64-JALANCI NIH HHS P30 CA008748NCI NIH HHS P50 CA247749U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) CA247749
6 · The paper itself

Abstract

Collisions of the transcription and replication machineries on the same DNA strand can pose a significant threat to genomic stability. These collisions occur in part due to the formation of RNA-DNA hybrids termed R-loops, in which a newly transcribed RNA molecule hybridizes with the DNA template strand. This study investigated the role of RAD52, a known DNA repair factor, in preventing collisions by directing R-loop formation and resolution. We show that RAD52 deficiency increases R-loop accumulation, exacerbating collisions and resulting in elevated DNA damage. Furthermore, RAD52's ability to interact with the transcription machinery, coupled with its capacity to facilitate R-loop dissolution, highlights its role in preventing collisions. Lastly, we provide evidence of an increased mutational burden from double-strand breaks at conserved R-loop sites in human tumor samples, which is increased in tumors with low RAD52 expression. In summary, this study underscores the importance of RAD52 in orchestrating the balance between replication and transcription processes to prevent collisions and maintain genome stability.

Indexed as

DNA ReplicationGenomic InstabilityRad52 DNA Repair and Recombination ProteinR-Loop StructuresTranscription, GeneticDNADNA Breaks, Double-StrandedDNA DamageDNA RepairHumansMutationNeoplasmsDNARad52 DNA Repair and Recombination ProteinRAD52 protein, human

Identifiers

PMID39237529
PMCPMC11377823

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.