Evidence map›Paper›PMID 39236186›Full record

ArticleScience (New York, N.Y.)2024

Achieving optical transparency in live animals with absorbing molecules.

Zihao Ou, Yi-Shiou Duh, Nicholas J Rommelfanger, Carl H C Keck, Shan Jiang, Kenneth Brinson, Su Zhao, Elizabeth L Schmidt, Xiang Wu, Fan Yang and 11 more

Registry-linked trialAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06800183 (Topical Application of Tartrazine for Enhanced Visualization of Subcutaneous Structures in Dermatology), which is not on this map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06800183 early_phase1withdrawnnot on this mapstarted 2026, after this paper: background citation

Topical Application of Tartrazine for Enhanced Visualization of Subcutaneous Structures in Dermatology

TypeinterventionalSponsorJohns Hopkins UniversityRan2026 to 2026Enrolled0ConditionsHealthy, Dermoscopy, Optical ImagingArmsFour-Chamber Tartrazine Patch across 3 Body Sites
3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

  1. Article
  2. Closing the Loop: High-Precision 3D Photofabrication in Living Tissues.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. Bright monomeric fluorescent protein elite-niRFP704 for two-channel near-infrared STED nanoscopy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Article
  8. The meta way of thinking.Nature materials · 2026
    Article
  9. Endothelial Continuum and Capillary Specialization in Pulmonary Vascular Development.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Zihao OuDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0003-2987-7423
Yi-Shiou DuhDepartment of Physics, Stanford University, Stanford, CA, USA.ORCID 0009-0008-3702-1610
Nicholas J RommelfangerWu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1367-3939
Carl H C KeckDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1944-4165
Shan JiangDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1567-2745
Kenneth BrinsonDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1447-9169
Su ZhaoDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0001-5797-9190
Elizabeth L SchmidtDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-7420-2997
Xiang WuDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0001-8872-7738
Fan YangDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0001-6306-4501
Betty CaiDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.
Han CuiDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0001-6473-9232
Wei QiDepartment of Biology, Stanford University, Stanford, CA, USA.
Shifu WuDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.
Adarsh TantryWu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA.ORCID 0000-0002-4211-5549
Richard RothDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0002-6855-999X
Jun DingDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0003-0690-1312
Xiaoke ChenDepartment of Biology, Stanford University, Stanford, CA, USA.ORCID 0000-0001-9032-9093
Julia A KaltschmidtWu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA.ORCID 0000-0002-2893-1793
Mark L BrongersmaDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0003-1777-8970
Guosong HongDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, USA.ORCID 0000-0002-8858-4471

Funding

Training Program in Basic NeuroscienceT32MH020016 · NIMH · STANFORD UNIVERSITY · PI Justin L Gardner, Merritt C Maduke · 1997 to 2026
$16.2M
Multi-modal profiling of spatially resolved cell types mediating opioid withdrawalR01DA059602 · NIDA · STANFORD UNIVERSITY · PI Bogdan Bintu, Xiaoke Chen · 2023 to 2026
$3.1M
Thalamic Circuits Underlying Opioid SeekingR01DA045664 · NIDA · STANFORD UNIVERSITY · PI CHEN, XIAOKE · 2018 to 2022
$2.3M
Thalamic Circuits for Prosocial Behaviors in MiceR01MH116904 · NIMH · STANFORD UNIVERSITY · PI CHEN, XIAOKE · 2019 to 2022
$1.8M
Rapid brain-wide optogenetic screening with a noninvasive, dynamically programmable in vivo light sourceRF1NS126076 · NINDS · STANFORD UNIVERSITY · PI BUTTS-PAULY, KIM, CHEN, XIAOKE · 2022 to 2022
$1.8M
Circuitry and Molecular Mechanisms for Descending Pain FacilitationR01NS129834 · NINDS · STANFORD UNIVERSITY · PI Xiaoke Chen · 2023 to 2026
$1.7M
Brain Aging Studies with Single-Neuron Resolution Using Syringe-Injectable ElectronicsR00AG056636 · NIA · STANFORD UNIVERSITY · PI HONG, GUOSONG · 2018 to 2020
$745k
Mesh electronics for understanding space encoding in the amphibian brainR34NS127103 · NINDS · STANFORD UNIVERSITY · PI GIOCOMO, LISA, HONG, GUOSONG · 2022 to 2022
$653k
NIA NIH HHS R00 AG056636NIDA NIH HHS R01 DA045664NIDA NIH HHS R01 DA059602NIMH NIH HHS R01 MH116904NIMH NIH HHS T32 MH020016NINDS NIH HHS R01 NS129834NINDS NIH HHS R34 NS127103NINDS NIH HHS RF1 NS126076
6 · The paper itself

Abstract

Optical imaging plays a central role in biology and medicine but is hindered by light scattering in live tissue. We report the counterintuitive observation that strongly absorbing molecules can achieve optical transparency in live animals. We explored the physics behind this observation and found that when strongly absorbing molecules dissolve in water, they can modify the refractive index of the aqueous medium through the Kramers-Kronig relations to match that of high-index tissue components such as lipids. We have demonstrated that our straightforward approach can reversibly render a live mouse body transparent to allow visualization of a wide range of deep-seated structures and activities. This work suggests that the search for high-performance optical clearing agents should focus on strongly absorbing molecules.

Indexed as

Optical ImagingAnimalsLightMiceMusclesRefractometryScattering, RadiationSkinWaterWater

Identifiers

PMID39236186
PMCPMC11931656

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.