Evidence map›Paper›PMID 39236067›Full record

ArticlePLoS computational biology2024

A Physics-Informed Neural Network approach for compartmental epidemiological models.

Caterina Millevoi, Damiano Pasetto, Massimiliano Ferronato

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Article in PLoS computational biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

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0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
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  9. From PINNs to PIKANs: recent advances in physics-informed machine learning.Machine learning for computational science and engineering · 2025
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Caterina MillevoiDepartment of Civil, Environmental and Architectural Engineering, University of Padova, via Marzolo 9, Padova, Italy.ORCID 0000-0002-9743-4547
Damiano PasettoDepartment of Environmental Sciences, Informatics and Statistics, Ca' Foscari University of Venice, Via Torino 155, Venezia Mestre, Italy.ORCID 0000-0001-6892-9826
Massimiliano FerronatoDepartment of Civil, Environmental and Architectural Engineering, University of Padova, via Marzolo 9, Padova, Italy.ORCID 0000-0002-5077-1394

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Compartmental models provide simple and efficient tools to analyze the relevant transmission processes during an outbreak, to produce short-term forecasts or transmission scenarios, and to assess the impact of vaccination campaigns. However, their calibration is not straightforward, since many factors contribute to the rapid change of the transmission dynamics. For example, there might be changes in the individual awareness, the imposition of non-pharmacological interventions and the emergence of new variants. As a consequence, model parameters such as the transmission rate are doomed to vary in time, making their assessment more challenging. Here, we propose to use Physics-Informed Neural Networks (PINNs) to track the temporal changes in the model parameters and the state variables. PINNs recently gained attention in many engineering applications thanks to their ability to consider both the information from data (typically uncertain) and the governing equations of the system. The ability of PINNs to identify unknown model parameters makes them particularly suitable to solve ill-posed inverse problems, such as those arising in the application of epidemiological models. Here, we develop a reduced-split approach for the implementation of PINNs to estimate the temporal changes in the state variables and transmission rate of an epidemic based on the SIR model equation and infectious data. The main idea is to split the training first on the epidemiological data, and then on the residual of the system equations. The proposed method is applied to five synthetic test cases and two real scenarios reproducing the first months of the Italian COVID-19 pandemic. Our results show that the split implementation of PINNs outperforms the joint approach in terms of accuracy (up to one order of magnitude) and computational times (speed up of 20%). Finally, we illustrate that the proposed PINN-method can also be adopted to produced short-term forecasts of the dynamics of an epidemic.

Indexed as

COVID-19Neural Networks, ComputerAlgorithmsComputational BiologyComputer SimulationEpidemicsEpidemiological ModelsHumansSARS-CoV-2

Identifiers

PMID39236067
PMCPMC11407682

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.