Evidence map›Paper›PMID 39235528›Full record

ArticleThe Journal of experimental medicine2024

SETD1B mutations confer apoptosis resistance and BCL2 independence in B cell lymphoma.

Ana Portelinha, Shenqiu Wang, Sara Parsa, Man Jiang, Alexander N Gorelick, Sagarajit Mohanty, Soumya Sharma, Elisa de Stanchina, Marjan Berishaj, Chunying Zhao and 9 more

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Ana Portelinha *Cancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0003-0518-9554
Shenqiu Wang *Cancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0002-0601-2075
Sara Parsa *Cancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0009-0003-1799-8874
Man JiangCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0003-1818-7427
Alexander N GorelickHuman Oncology and Pathogenesis Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0001-6736-8246
Sagarajit MohantyCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0001-7935-7798
Soumya SharmaCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0009-0003-7650-3720
Elisa de StanchinaAntitumor Assessment Core, Memorial Sloan Kettering Cancer Center , New York, NY, USA.ORCID 0000-0002-3873-315X
Marjan BerishajCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0009-0006-1872-6522
Chunying ZhaoCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0009-0006-1229-0756
James HewardNucleome Therapeutics , Oxford, UK.ORCID 0000-0002-4022-1532
Neeraj K AryalBioscience, Early Oncology R&D, AstraZeneca , Waltham, MA, USA.ORCID 0000-0002-4643-7078
Omid TavanaBioscience, Early Oncology R&D, AstraZeneca , Waltham, MA, USA.ORCID 0000-0001-8401-4546
Jiayu WenDivision of Genome Sciences and Cancer, The John Curtin School of Medical Research, The Australian National University and Australian Research Council Centre of Excellence for the Mathematical Analysis of Cellular Systems, Canberra, Australia.ORCID 0000-0003-1249-6456
Jude FitzgibbonHaematology R&D, AstraZeneca , Waltham, MA, USA.ORCID 0000-0002-9069-1866
Ahmet DoganDepartments of Pathology and Laboratory Medicine, Hematopathology Service, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-6576-5256
Anas YounesHaematology R&D, AstraZeneca , New York, NY, USA.ORCID 0000-0002-0001-4133
Ari M MelnickHematology and Oncology Division, Medicine Department, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0002-8074-2287
Hans-Guido WendelCancer Biology and Genetics Program, Memorial Sloan-Kettering Cancer Center , New York, NY, USA.ORCID 0000-0002-4608-222X

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Targeting Oncogenic Pathways in Genetically Complex SarcomasP50CA217694 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI William D. Tap · 2018 to 2026
$21.5M
The impact of changes in chromatin architecture on cancer phenotypes and tumor progressionP01CA229086 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Jane Amanda Skok · 2019 to 2026
$17.0M
Targeting Epigenetic Circuits in B-Cell LymphomasR35CA220499 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MELNICK, ARI M. · 2018 to 2024
$7.2M
Towards targeting the lymphoma microenvironmentR35CA252982 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Hans-Guido Wendel · 2020 to 2026
$6.2M
BAF complex deregulation in lymphomaR01CA266279 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Michael Richard Green, Christopher Edward Mason · 2022 to 2026
$3.4M
Astrazeneca SK2021-1271Australian Research Council Centre of Excellence for the Mathematical Analysis of Cellular Systems CE230100001Chemotherapy FoundationFollicular Lymphoma FoundationGeoffrey Beene Cancer Research CenterInstitute for Follicular Lymphoma InnovationLeukemia and Lymphoma Society LLS SCOR 7021-20Lymphoma Research FoundationNCI NIH HHS P01 CA229086NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA217694NCI NIH HHS R01 CA266279NCI NIH HHS R35 CA220499NCI NIH HHS R35 CA252982NIH HHS P50 CA217694Sam Waxman FoundationStarr Cancer Consortium I10-0064
6 · The paper itself

Abstract

The translocation t(14;18) activates BCL2 and is considered the initiating genetic lesion in most follicular lymphomas (FL). Surprisingly, FL patients fail to respond to the BCL2 inhibitor, Venetoclax. We show that mutations and deletions affecting the histone lysine methyltransferase SETD1B (KMT2G) occur in 7% of FLs and 16% of diffuse large B cell lymphomas (DLBCL). Deficiency in SETD1B confers striking resistance to Venetoclax and an experimental MCL-1 inhibitor. SETD1B also acts as a tumor suppressor and cooperates with the loss of KMT2D in lymphoma development in vivo. Consistently, loss of SETD1B in human lymphomas typically coincides with loss of KMT2D. Mechanistically, SETD1B is required for the expression of several proapoptotic BCL2 family proteins. Conversely, inhibitors of the KDM5 histone H3K4 demethylases restore BIM and BIK expression and synergize with Venetoclax in SETD1B-deficient lymphomas. These results establish SETD1B as an epigenetic regulator of cell death and reveal a pharmacological strategy to augment Venetoclax sensitivity in lymphoma.

Indexed as

ApoptosisHistone-Lysine N-MethyltransferaseMutationProto-Oncogene Proteins c-bcl-2AnimalsBridged Bicyclo Compounds, HeterocyclicCell Line, TumorDNA-Binding ProteinsDrug Resistance, NeoplasmHumansLymphoma, B-CellLymphoma, Large B-Cell, DiffuseMiceNeoplasm ProteinsSulfonamidesBCL2 protein, humanBridged Bicyclo Compounds, HeterocyclicDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseKMT2D protein, humanNeoplasm ProteinsProto-Oncogene Proteins c-bcl-2SETD1B protein, humanSulfonamidesvenetoclax

Identifiers

PMID39235528
PMCPMC11380151

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.