Evidence map›Paper›PMID 39233332›Full record

ArticleJournal of cellular and molecular medicine2024

Ethanol extract of Vanilla planifolia stems reduces PAK6 expression and induces cell death in glioblastoma cells.

Hui Hua Chang, Alice Y W Chang, Bing-Chen Tsai, Yu-Ju Chen, Sung-Ghun Wu, Li-Jyun Chen, Yi-Xuan Lin, Yuan-Shuo Hsueh

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. The therapeutic potential ofFrontiers in pharmacology · 2026
    Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hui Hua ChangInstitute of Clinical Pharmacy and Pharmaceutical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Alice Y W ChangDepartment of Physiology, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Bing-Chen TsaiDepartment of Physiology, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Yu-Ju ChenDepartment of Medical Science Industries, College of Health Sciences, Chang Jung Christian University, Tainan, Taiwan.
Sung-Ghun WuDepartment of Medical Science Industries, College of Health Sciences, Chang Jung Christian University, Tainan, Taiwan.
Li-Jyun ChenGraduate Institute of Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan.
Yi-Xuan LinDepartment of Medical Science Industries, College of Health Sciences, Chang Jung Christian University, Tainan, Taiwan.
Yuan-Shuo HsuehDepartment of Physiology, School of Post Baccalaureate Medicine, College of Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan.ORCID 0000-0002-2584-9380

Funding

Kaohsiung Medical University 113CM-KMU-10Kaohsiung Medical University KMU-Q113010Kaohsiung Medical University KMU-TC113A04Ministry of Science and Technology, Taiwan MOST 109-2314-B-309-002Ministry of Science and Technology, Taiwan MOST 110-2314-B-309-001National Cheng Kung University Hospital NCKUH-11202014National Cheng Kung University Hospital NCKUH-11302031National Science and Technology Council NSTC 111-2314-B-309-001National Science and Technology Council NSTC 111-2628-B-006-010-MY3National Science and Technology Council NSTC 113-2320-B-037-025
6 · The paper itself

Abstract

Glioblastoma multiforme (GBM) is a malignant tumour with a poor prognosis. Therefore, potential treatment strategies and novel therapeutic targets have gained increased attention. Our data showed that the ethanol extract of Vanilla planifolia stem (VAS) significantly decreased the viability and the colony formation of GBM cells. Moreover, VAS induced the cleavage of MAP1LC3, a marker of autophagy. Further RNA-seq and bioinformatic analysis revealed 4248 differentially expressed genes (DEGs) between VAS-treated GBM cells and the control cells. Protein-protein interactions between DEGs with fold changes less than -3 and more than 5 were further analysed, and we found that 16 and 9 hub DEGs, respectively, were correlated with other DEGs. Further qPCR experiments confirmed that 14 hub DEGs was significantly downregulated and 9 hub DEGs was significantly upregulated. In addition, another significantly downregulated DEG, p21-activated kinase 6 (PAK6), was correlated with the overall survival of GBM patients. Further validation experiments confirmed that VAS significantly reduced the mRNA and protein expression of PAK6, which led to the abolition of cell viability and colony formation. These findings demonstrated that VAS reduced cell viability, suppressed colony formation and induced autophagy and revealed PAK6 and other DEGs as potential therapeutic targets for GBM treatment.

Indexed as

AutophagyGene Expression Regulation, NeoplasticGlioblastomap21-Activated KinasesPlant ExtractsCell DeathCell Line, TumorCell ProliferationCell SurvivalEthanolHumansPlant StemsProtein Interaction MapsEthanolp21-Activated KinasesPlant Extractsdifferentially expressed genesglioblastoma multiformePAK6therapeutic targetsVanilla planifolia

Identifiers

PMID39233332
PMCPMC11374694

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.