Evidence map›Paper›PMID 39233005›Full record

ArticlePractical radiation oncology

Comprehensive Clinical Usability-Oriented Contour Quality Evaluation for Deep Learning Auto-segmentation: Combining Multiple Quantitative Metrics Through Machine Learning.

Ying Zhang, Asma Amjad, Jie Ding, Christina Sarosiek, Mohammad Zarenia, Renae Conlin, William A Hall, Beth Erickson, Eric Paulson

Abstract read
In one paragraph

Article in Practical radiation oncology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ying ZhangDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin; Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas. Electronic address: ying.zhang@UTSouthwestern.edu.
Asma AmjadDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.
Jie DingDepartment of Radiation Oncology, Emory University School of Medicine, Atlanta, Georgia.
Christina SarosiekDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.
Mohammad ZareniaDepartment of Radiation Medicine, MedStar Georgetown University Hospital, Washington, District of Columbia.
Renae ConlinDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.
William A HallDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.
Beth EricksonDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.
Eric PaulsonDepartment of Radiation Oncology, Medical College of Wisconsin, Milwaukee, Wisconsin.

Funding

Machine learning accelerated on-line adaptive replanningR01CA247960 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI PAULSON, ERIC S · 2020 to 2024
$2.4M
NCI NIH HHS R01 CA247960
6 · The paper itself

Abstract

purposeThe current commonly used metrics for evaluating the quality of auto-segmented contours have limitations and do not always reflect the clinical usefulness of the contours. This work aims to develop a novel contour quality classification (CQC) method by combining multiple quantitative metrics for clinical usability-oriented contour quality evaluation for deep learning-based auto-segmentation (DLAS). METHODS AND MATERIALS: The CQC was designed to categorize contours on slices as acceptable, minor edit, or major edit based on the expected editing effort/time with supervised ensemble tree classification models using 7 quantitative metrics. Organ-specific models were trained for 5 abdominal organs (pancreas, duodenum, stomach, small, and large bowels) using 50 magnetic resonance imaging (MRI) data sets. Twenty additional MRI and 9 computed tomography (CT) data sets were employed for testing. Interobserver variation (IOV) was assessed among 6 observers and consensus labels were established through majority vote for evaluation. The CQC was also compared with a threshold-based baseline approach.

resultsFor the 5 organs, the average area under the curve was 0.982 ± 0.01 and 0.979 ± 0.01, the mean accuracy was 95.8% ± 1.7% and 94.3% ± 2.1%, and the mean risk rate was 0.8% ± 0.4% and 0.7% ± 0.5% for MRI and CT testing data set, respectively. The CQC results closely matched the IOV results (mean accuracy of 94.2% ± 0.8% and 94.8% ± 1.7%) and were significantly higher than those obtained using the threshold-based method (mean accuracy of 80.0% ± 4.7%, 83.8% ± 5.2%, and 77.3% ± 6.6% using 1, 2, and 3 metrics).

conclusionsThe CQC models demonstrated high performance in classifying the quality of contour slices. This method can address the limitations of existing metrics and offers an intuitive and comprehensive solution for clinically oriented evaluation and comparison of DLAS systems.

Indexed as

Deep LearningMagnetic Resonance ImagingTomography, X-Ray ComputedHumansImage Processing, Computer-AssistedMachine Learning

Identifiers

PMID39233005
PMCPMC11711007

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.