Evidence map›Paper›PMID 39232195›Full record

ArticleCommunications biology2024

Stress responses in an Arctic microalga (Pelagophyceae) following sudden salinity change revealed by gene expression analysis.

Nastasia J Freyria, Thais C de Oliveira, Mansi Chovatia, Jennifer Johnson, Alan Kuo, Anna Lipzen, Kerrie W Barry, Igor V Grigoriev, Connie Lovejoy

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nastasia J FreyriaDepartment of Natural Resource Sciences, McGill University, Ste. Anne-de-Bellevue, QC, Canada. nastasia.freyria@mcgill.ca.ORCID 0000-0002-4972-9383
Thais C de OliveiraInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.ORCID 0000-0002-7565-7563
Mansi ChovatiaU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Jennifer JohnsonU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Alan KuoU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Anna LipzenU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0003-2293-9329
Kerrie W BarryU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Igor V GrigorievU.S. Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Connie LovejoyInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada. Connie.Lovejoy@bio.ulaval.ca.ORCID 0000-0001-8027-2281

Funding

Canada First Research Excellence Fund (Fonds d'excellence en recherche Apogée Canada) Sentinelle NordDOE | Office of Science (SC) DE-AC02-05CH1123
6 · The paper itself

Abstract

Marine microbes that have for eons been adapted to stable salinity regimes are confronted with sudden decreases in salinity in the Arctic Ocean. The episodic freshening is increasing due to climate change with melting multi-year sea-ice and glaciers, greater inflows from rivers, and increased precipitation. To investigate algal responses to lowered salinity, we analyzed the responses and acclimatation over 24 h in a non-model Arctic marine alga (pelagophyte CCMP2097) following transfer to realistic lower salinities. Using RNA-seq transcriptomics, here we show rapid differentially expressed genes related to stress oxidative responses, proteins involved in the photosystem and circadian clock, and those affecting lipids and inorganic ions. After 24 h the pelagophyte adjusted to the lower salinity seen in the overexpression of genes associated with freezing resistance, cold adaptation, and salt tolerance. Overall, a suite of ancient widespread pathways is recruited enabling the species to adjust to the stress of rapid salinity change.

Indexed as

MicroalgaeSalinityArctic RegionsClimate ChangeGene Expression ProfilingSalt ToleranceStress, PhysiologicalTranscriptome

Identifiers

PMID39232195
PMCPMC11375080

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.