Evidence map›Paper›PMID 39229235›Full record

ArticlebioRxiv : the preprint server for biology2024

Characterization, enrichment, and computational modeling of cross-linked actin networks in trabecular meshwork cells.

Haiyan Li, Devon H Harvey, Jiannong Dai, Steven P Swingle, Anthony M Compton, Chenna Kesavulu Sugali, Kamesh Dhamodaran, Jing Yao, Tsai-Yu Lin, Todd Sulchek and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Haiyan LiWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology/Emory University, Atlanta, GA.
Devon H HarveyEugene and Marilyn Glick Eye Institute, Indiana University, Indianapolis, Indiana.
Jiannong DaiEugene and Marilyn Glick Eye Institute, Indiana University, Indianapolis, Indiana.
Steven P SwingleDepartment of Mechanical Engineering, Georgia Institute of Technology, Atlanta, GA.
Anthony M ComptonWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology/Emory University, Atlanta, GA.
Chenna Kesavulu SugaliEugene and Marilyn Glick Eye Institute, Indiana University, Indianapolis, Indiana.
Kamesh DhamodaranEugene and Marilyn Glick Eye Institute, Indiana University, Indianapolis, Indiana.
Jing YaoDepartment of Medical and Molecular Genetics, Indiana University, Indianapolis, Indiana.
Tsai-Yu LinDepartment of Medical and Molecular Genetics, Indiana University, Indianapolis, Indiana.
Todd SulchekWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology/Emory University, Atlanta, GA.
Taeyoon KimWeldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana.
C Ross EthierWallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology/Emory University, Atlanta, GA.ORCID 0000-0001-6110-3052
Weiming MaoEugene and Marilyn Glick Eye Institute, Indiana University, Indianapolis, Indiana.

Funding

The role of Wnt signaling in treating glucocorticoid-induced glaucomaR01EY031700 · NEI · INDIANA UNIVERSITY INDIANAPOLIS · PI MAO, WEIMING · 2021 to 2025
$2.5M
Transcriptional and Biomechanical Analysis of Segmental Outflow in GlaucomaR01EY031710 · NEI · GEORGIA INSTITUTE OF TECHNOLOGY · PI ETHIER, C ROSS, GUPTA, DIVAKAR · 2020 to 2023
$2.4M
Cross-talk between TGF-beta and Wnt pathways in the trabecular meshworkR01EY026962 · NEI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI MAO, WEIMING · 2017 to 2021
$1.9M
The role of distal aqueous humor outflow tissue in glucocorticoid-induced glaucomaR21EY033929 · NEI · INDIANA UNIVERSITY INDIANAPOLIS · PI MAO, WEIMING · 2023 to 2024
$436k
Identification of genes responsible for glucocorticoid-induced glaucomaR21EY023048 · NEI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI MAO, WEIMING · 2013 to 2014
$388k
NEI NIH HHS R01 EY026962NEI NIH HHS R01 EY031700NEI NIH HHS R01 EY031710NEI NIH HHS R21 EY023048NEI NIH HHS R21 EY033929
6 · The paper itself

Abstract

Purpose: Cross-linked actin networks (CLANs) are prevalent in the glaucomatous trabecular meshwork (TM), yet their role in ocular hypertension remains unclear. We used a human TM cell line that spontaneously forms fluorescently-labeled CLANs (GTM3L) to explore the origin of CLANs, developed techniques to increase CLAN incidence in GMT3L cells, and computationally studied the biomechanical properties of CLAN-containing cells. Methods: GTM3L cells were fluorescently sorted for viral copy number analysis. CLAN incidence was increased by (i) differential sorting of cells by adhesion, (ii) cell deswelling, and (iii) cell selection based on cell stiffness. GTM3L cells were also cultured on glass or soft hydrogel to determine substrate stiffness effects on CLAN incidence. Computational models were constructed to mimic and study the biomechanical properties of CLANs. Results: All GTM3L cells had an average of 1 viral copy per cell. LifeAct-GFP expression level did not affect CLAN incidence rate, but CLAN rate was increased from ~0.28% to ~50% by a combination of adhesion selection, cell deswelling, and cell stiffness-based sorting. Further, GTM3L cells formed more CLANs on a stiff vs. a soft substrate. Computational modeling predicted that CLANs contribute to higher cell stiffness, including increased resistance of the nucleus to tensile stress when CLANs are physically linked to the nucleus. Conclusions: It is possible to greatly enhance CLAN incidence in GTM3L cells. CLANs are mechanosensitive structures that affect cell biomechanical properties. Further research is needed to determine the effect of CLANs on TM biomechanics and mechanobiology as well as the etiology of CLAN formation in the TM.

Identifiers

PMID39229235
PMCPMC11370370

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.