Evidence map›Paper›PMID 39228743›Full record

ArticlemedRxiv : the preprint server for health sciences2024

Respiratory virus detection and sequencing from negative SARS-CoV-2 rapid antigen tests.

Emmanuela Jules, Charlie Decker, Brianna Jeanne Bixler, Alaa Ahmed, Zijing Carol Zhou, Itika Arora, Henok Tafesse, Hannah Dakanay, Andrei Bombin, Ethan Wang and 10 more

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Emmanuela JulesDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0009-0000-7810-8044
Charlie DeckerDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0009-0007-5645-246X
Brianna Jeanne BixlerDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0001-7482-5820
Alaa AhmedDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0003-0017-9269
Zijing Carol ZhouDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.
Itika AroraDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0003-3761-4455
Henok TafesseDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0009-0002-0677-5301
Hannah DakanayDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.
Andrei BombinDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0003-2445-304X
Ethan WangDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.
Jessica IngersollDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.
Kathy BifulcoNell Hodgson Woodruff School of Nursing, Emory University, Atlanta, Georgia, USA.
Jennifer K FredianiNell Hodgson Woodruff School of Nursing, Emory University, Atlanta, Georgia, USA.ORCID 0000-0002-4634-0591
Richard ParsonsNell Hodgson Woodruff School of Nursing, Emory University, Atlanta, Georgia, USA.
Julie SullivanThe Atlanta Center for Microsystems-Engineered Point-of-Care Technologies, Atlanta, GA, USA.ORCID 0000-0002-5681-747X
Morgan GreenleafThe Atlanta Center for Microsystems-Engineered Point-of-Care Technologies, Atlanta, GA, USA.ORCID 0000-0003-1569-5696
Jesse J WaggonerDivision of Infectious Diseases; Department of Medicine, Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0002-0244-5957
Greg S MartinDivision of Pulmonary, Allergy, Critical Care Medicine and Sleep Medicine, Emory University, Atlanta, GA 30303, USA.ORCID 0000-0002-9684-7593
Wilbur A LamDepartment of Pediatrics, Emory University School of Medicine, Atlanta, GA, USA.ORCID 0000-0002-0325-7990
Anne PiantadosiDepartment of Pathology and Laboratory Medicine; Emory University School of Medicine; Atlanta, GA, 30322; USA.ORCID 0000-0002-5942-1534

Funding

Technology Training and Dissemination CoreU54EB027690 · NIBIB · EMORY UNIVERSITY · PI Wilbur A Lam, GREGORY S MARTIN · 2018 to 2026
$96.1M
Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
NCATS NIH HHS UL1 TR002378NIBIB NIH HHS U54 EB027690
6 · The paper itself

Abstract

Genomic epidemiology offers important insight into the transmission and evolution of respiratory viruses. We used metagenomic sequencing from negative SARS-CoV-2 antigen tests to identify a wide range of respiratory viruses and generate full genome sequences, offering a streamlined mechanism for broad respiratory virus genomic surveillance.

Indexed as

molecular epidemiologypublic health surveillancerespiratory tract infectionsSARS-CoV-2

Identifiers

PMID39228743
PMCPMC11370544

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.