Evidence map›Paper›PMID 39227733›Full record

ArticleScientific reports2024

Genome-wide discovery of selection signatures in four Anatolian sheep breeds revealed by ddRADseq.

Bahar Argun Karsli, Eymen Demir, Umit Bilginer, Huriye Dogru, Taki Karsli, Sarp Kaya

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Assessment of genome-wide genetic variability and population divergence of four native Turkish sheep breeds.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  6. Candidate genes related to growth and milk production in three Anatolian goats revealed by GWAS.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Bahar Argun KarsliDepartment of Agricultural Biotechnology, Faculty of Agriculture, Eskişehir Osmangazi University, Eskişehir, 26160, Türkiye. bargun.karsli@ogu.edu.tr.
Eymen DemirDepartment of Animal Science, Faculty of Agriculture, Akdeniz University, Antalya, 07070, Türkiye.
Umit BilginerDepartment of Animal Science, Faculty of Agriculture, Akdeniz University, Antalya, 07070, Türkiye.
Huriye DogruDepartment of Medical Services and Techniques, Vocational School of Burdur Health Services, Burdur Mehmet Akif Ersoy University, Burdur, 15100, Türkiye.
Taki KarsliInstitution Department of Animal Science, Faculty of Agriculture, Eskisehir Osmangazi University, Eskisehir, 26160, Türkiye.
Sarp KayaDepartment of Medical Services and Techniques, Vocational School of Burdur Health Services, Burdur Mehmet Akif Ersoy University, Burdur, 15100, Türkiye.

Funding

Türkiye Bilimsel ve Teknolojik Araştırma Kurumu 122C111
6 · The paper itself

Abstract

High-density genomic data analyzed by accurate statistical methods are of potential to enlighten past breeding practices such as selection by unraveling fixed regions. In this study, four native Turkish sheep breeds (80 samples) were genotyped via 296.097 single nucleotide polymorphisms (SNPs) detected by double-digest restriction site-associated DNA (ddRADseq) library preparation combined with the Illumina HiSeq X Ten instrument in order to identify genes under selection pressure. A total of 32, 136, 133, and 119 protein-coding genes were detected under selection pressure by runs of homozygosity (ROH), integrated haplotype score (iHS), the ratio of extended haplotype homozygosity (Rsb), and fixation index (F

Indexed as

Polymorphism, Single NucleotideSelection, GeneticAnimalsBreedingGenome-Wide Association StudyGenotypeHaplotypesHomozygoteQuantitative Trait LociSheepTurkeyddRADseqNGSSelection signalsSelection sweepsTurkish sheep

Identifiers

PMID39227733
PMCPMC11371811

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.